STRINGSTRING
OJA04303.1 OJA04303.1 OJA04329.1 OJA04329.1 gabD gabD OJA04573.1 OJA04573.1 OJA04724.1 OJA04724.1 OJA05218.1 OJA05218.1 OJA05290.1 OJA05290.1 OJA05337.1 OJA05337.1 OJA07378.1 OJA07378.1 OJA05578.1 OJA05578.1 hisC hisC gabD-2 gabD-2 OJA05867.1 OJA05867.1 OJA05878.1 OJA05878.1 QHL1GM_11230 QHL1GM_11230 OJA06115.1 OJA06115.1 OJA06156.1 OJA06156.1 OJA06800.1 OJA06800.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OJA04303.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
OJA04329.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (69 aa)
gabDSuccinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
OJA04573.1S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)
OJA04724.1Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
OJA05218.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
OJA05290.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
OJA05337.1S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)
OJA07378.1Zinc-dependent alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
OJA05578.1Isomerase/hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
hisCHistidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (338 aa)
gabD-2Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
OJA05867.1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
OJA05878.12-dehydro-3-deoxyglucarate aldolase; Cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (266 aa)
QHL1GM_11230Integrase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
OJA06115.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)
OJA06156.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
OJA06800.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
Your Current Organism:
Halomonas sp. QHL1
NCBI taxonomy Id: 1123773
Other names: H. sp. QHL1
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