(38 nodes) Structural constituent of nuclear pore, and Ran-binding domain network (Hordeum vulgare)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	A0A287EII4	WD_REPEATS_REGION domain-containing protein. (409 aa)
	A0A287ELK1	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1166 aa)
	A0A287F2U4	Uncharacterized protein. (1258 aa)
	A0A287FHK2	Uncharacterized protein. (151 aa)
	A0A287GAK5	Nuclear pore complex protein NUP35. (331 aa)
	A0A287GNR8	Uncharacterized protein. (180 aa)
	A0A287I0I4	Uncharacterized protein. (105 aa)
	A0A287I0Z4	Nup54 domain-containing protein. (388 aa)
	A0A287I449	GRIP domain-containing protein. (811 aa)
	A0A287J652	Uncharacterized protein. (822 aa)
	A0A287JNA7	RanBD1 domain-containing protein. (396 aa)
	A0A287KI91	Nuclear pore complex protein NUP35. (311 aa)
	A0A287KQU8	Peptidase S59 domain-containing protein. (947 aa)
	A0A287L548	WD_REPEATS_REGION domain-containing protein. (399 aa)
	A0A287LI84	Uncharacterized protein. (105 aa)
	A0A287LK91	Nuclear pore complex protein NUP35. (312 aa)
	A0A287LKB5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (754 aa)
	A0A287PF97	Uncharacterized protein. (1492 aa)
	A0A287PPP0	Peptidase S59 domain-containing protein. (1048 aa)
	A0A287QNT6	Uncharacterized protein. (120 aa)
	A0A287QSR5	Uncharacterized protein. (1155 aa)
	A0A287R0Y4	ANAPC4_WD40 domain-containing protein. (501 aa)
	A0A287RMA5	Uncharacterized protein. (120 aa)
	A0A287S8F0	Uncharacterized protein. (1966 aa)
	GATC	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (161 aa)
	A0A287SVT1	X8 domain-containing protein. (415 aa)
	A0A287TJ67	DUF5311 domain-containing protein. (1564 aa)
	A0A287TYF6	Uncharacterized protein. (1852 aa)
	A0A287UKK4	Uncharacterized protein. (83 aa)
	A0A287URE6	TPR_MLP1_2 domain-containing protein. (2002 aa)
	A0A287VXB0	Uncharacterized protein. (1963 aa)
	A0A287XLH7	RanBD1 domain-containing protein. (498 aa)
	F2DA31_HORVV	Predicted protein. (222 aa)
	F2DG10_HORVV	Predicted protein. (716 aa)
	F2DJ14_HORVV	Predicted protein; Belongs to the WD repeat SEC13 family. (317 aa)
	M0UNH5_HORVV	Nuclear pore protein. (868 aa)
	M0WSX7_HORVV	PPIase cyclophilin-type domain-containing protein. (823 aa)
	M0XSD4_HORVV	RanBD1 domain-containing protein. (276 aa)

Your Current Organism:

Hordeum vulgare

NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A287EII4	A0A287ELK1	A0A287EII4	A0A287ELK1	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.907
A0A287EII4	A0A287F2U4	A0A287EII4	A0A287F2U4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.907
A0A287EII4	A0A287FHK2	A0A287EII4	A0A287FHK2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.861
A0A287EII4	A0A287GAK5	A0A287EII4	A0A287GAK5	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein NUP35.	0.857
A0A287EII4	A0A287GNR8	A0A287EII4	A0A287GNR8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.888
A0A287EII4	A0A287I0I4	A0A287EII4	A0A287I0I4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.907
A0A287EII4	A0A287I0Z4	A0A287EII4	A0A287I0Z4	WD_REPEATS_REGION domain-containing protein.	Nup54 domain-containing protein.	0.975
A0A287EII4	A0A287I449	A0A287EII4	A0A287I449	WD_REPEATS_REGION domain-containing protein.	GRIP domain-containing protein.	0.794
A0A287EII4	A0A287J652	A0A287EII4	A0A287J652	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.873
A0A287EII4	A0A287JNA7	A0A287EII4	A0A287JNA7	WD_REPEATS_REGION domain-containing protein.	RanBD1 domain-containing protein.	0.860
A0A287EII4	A0A287KI91	A0A287EII4	A0A287KI91	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein NUP35.	0.857
A0A287EII4	A0A287KQU8	A0A287EII4	A0A287KQU8	WD_REPEATS_REGION domain-containing protein.	Peptidase S59 domain-containing protein.	0.994
A0A287EII4	A0A287L548	A0A287EII4	A0A287L548	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.942
A0A287EII4	A0A287LI84	A0A287EII4	A0A287LI84	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.907
A0A287EII4	A0A287LK91	A0A287EII4	A0A287LK91	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein NUP35.	0.857
A0A287EII4	A0A287LKB5	A0A287EII4	A0A287LKB5	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.948
A0A287EII4	A0A287PF97	A0A287EII4	A0A287PF97	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.861
A0A287EII4	A0A287PPP0	A0A287EII4	A0A287PPP0	WD_REPEATS_REGION domain-containing protein.	Peptidase S59 domain-containing protein.	0.994
A0A287EII4	A0A287QNT6	A0A287EII4	A0A287QNT6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.907
A0A287EII4	A0A287QSR5	A0A287EII4	A0A287QSR5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.972

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