151 items (Hordeum vulgare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A287RF50	Uncharacterized protein. (198 aa)
	A0A287R8D3	Uncharacterized protein. (87 aa)
	A0A287G0J4	TFIIB-type domain-containing protein. (331 aa)
	A0A287G0J6	TFIIB-type domain-containing protein. (316 aa)
	A0A287G222	Uncharacterized protein. (161 aa)
	A0A287G252	Uncharacterized protein. (182 aa)
	A0A287GCN2	Uncharacterized protein. (279 aa)
	A0A287GDI6	TFIIB-type domain-containing protein. (330 aa)
	A0A287GDK8	TFIIB domain-containing protein. (186 aa)
	A0A287GPP0	Uncharacterized protein. (121 aa)
	A0A287H8S3	Uncharacterized protein. (198 aa)
	A0A287HDN1	Uncharacterized protein. (215 aa)
	A0A287HDR4	Uncharacterized protein. (75 aa)
	A0A287HG46	RNA_pol_Rpb5_C domain-containing protein. (112 aa)
	A0A287HK45	RPOL9 domain-containing protein. (117 aa)
	A0A287HKG7	Uncharacterized protein. (49 aa)
	A0A287HUC3	RNA_pol_Rpb2_6 domain-containing protein. (142 aa)
	A0A287I9Y8	SANTA domain-containing protein. (486 aa)
	A0A287IA11	SANTA domain-containing protein. (520 aa)
	A0A287IA19	Uncharacterized protein. (161 aa)
	A0A287IA29	SANTA domain-containing protein. (335 aa)
	A0A287IFV7	SANTA domain-containing protein. (470 aa)
	A0A287IPU8	SANTA domain-containing protein. (66 aa)
	A0A287IPZ3	Uncharacterized protein. (276 aa)
	A0A287IQ06	Uncharacterized protein. (204 aa)
	A0A287JDX6	Uncharacterized protein. (290 aa)
	A0A287JGW2	Uncharacterized protein. (59 aa)
	A0A287JJ84	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1107 aa)
	A0A287JNG2	DUF4101 domain-containing protein. (725 aa)
	A0A287JQ04	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (1007 aa)
	A0A287JQD6	Uncharacterized protein. (318 aa)
	A0A287K0F5	TFA2_Winged_2 domain-containing protein. (199 aa)
	A0A287K695	Uncharacterized protein. (1192 aa)
	A0A287KEC6	TFIIA_gamma_N domain-containing protein. (135 aa)
	A0A287KFH6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (318 aa)
	A0A287KFI4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (315 aa)
	A0A287KN97	Uncharacterized protein. (81 aa)
	A0A287KS07	Uncharacterized protein. (35 aa)
	A0A287KZ27	RNA_GG_bind domain-containing protein. (254 aa)
	A0A287L8V5	Uncharacterized protein; Belongs to the cyclin family. (384 aa)
	A0A287LB10	TAFII28 domain-containing protein. (216 aa)
	A0A287LJS9	Uncharacterized protein. (82 aa)
	A0A287LMQ8	SANTA domain-containing protein. (247 aa)
	A0A287LPV5	Uncharacterized protein. (301 aa)
	A0A287MA17	Beta-Casp domain-containing protein. (690 aa)
	A0A287MAK3	Uncharacterized protein. (67 aa)
	A0A287MAR9	Uncharacterized protein. (605 aa)
	A0A287MDT7	Uncharacterized protein. (368 aa)
	A0A287MDV2	CID domain-containing protein. (147 aa)
	A0A287MGH9	TFIIA_gamma_N domain-containing protein. (108 aa)
	A0A287MN43	Uncharacterized protein. (72 aa)
	A0A287MS85	Uncharacterized protein. (192 aa)
	A0A287MWZ5	CID domain-containing protein. (1110 aa)
	A0A287MXF6	Uncharacterized protein. (337 aa)
	A0A287NGC1	Uncharacterized protein. (494 aa)
	A0A287EX57	SHS2_Rpb7-N domain-containing protein. (234 aa)
	A0A287EXQ0	Uncharacterized protein. (209 aa)
	A0A287F3Y6	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (589 aa)
	A0A287F4A7	Uncharacterized protein. (299 aa)
	A0A287FBB0	Uncharacterized protein. (89 aa)
	A0A287FEZ0	Uncharacterized protein. (116 aa)
	A0A287FGE1	Uncharacterized protein. (49 aa)
	A0A287FKJ9	RNA_pol_Rpb5_C domain-containing protein. (112 aa)
	A0A287FRZ6	Uncharacterized protein. (61 aa)
	A0A287FW07	Uncharacterized protein. (177 aa)
	A0A287FWH8	Uncharacterized protein. (52 aa)
	A0A287QZJ3	Uncharacterized protein. (228 aa)
	A0A287QWI1	Uncharacterized protein; Belongs to the cyclin family. (545 aa)
	A0A287QVX8	Uncharacterized protein. (108 aa)
	A0A287QV61	Uncharacterized protein. (233 aa)
	A0A287QMS3	RPOL9 domain-containing protein. (157 aa)
	A0A287QHX3	Uncharacterized protein. (89 aa)
	A0A287QEE6	TFIIS-type domain-containing protein. (72 aa)
	A0A287NI05	Uncharacterized protein; Belongs to the cyclin family. (440 aa)
	A0A287NI07	Uncharacterized protein; Belongs to the cyclin family. (479 aa)
	A0A287NMK3	CID domain-containing protein. (585 aa)
	A0A287NNY8	RNA_pol_Rpb5_C domain-containing protein. (112 aa)
	A0A287NW69	RNA_pol_Rpb2_2 domain-containing protein. (62 aa)
	A0A287NWT2	RNA_pol_Rpb1_5 domain-containing protein. (583 aa)
	A0A287NX67	Uncharacterized protein. (428 aa)
	A0A287NXJ6	Uncharacterized protein. (78 aa)
	A0A287NYS4	MIF4G domain-containing protein. (904 aa)
	A0A287P3G3	TFIIA_gamma_N domain-containing protein. (71 aa)
	A0A287P5N8	Uncharacterized protein. (82 aa)
	A0A287P5P1	Uncharacterized protein. (72 aa)
	A0A287P8C0	Uncharacterized protein. (801 aa)
	A0A287PB06	Uncharacterized protein. (139 aa)
	A0A287PBE3	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (640 aa)
	A0A287PE15	Uncharacterized protein. (89 aa)
	A0A287R628	RPOLD domain-containing protein. (369 aa)
	A0A287R0Z6	Uncharacterized protein. (213 aa)
	A0A287DVG3	Uncharacterized protein. (69 aa)
	A0A287DVM0	SANTA domain-containing protein. (112 aa)
	A0A287DWG3	Uncharacterized protein. (158 aa)
	A0A287DZ88	CID domain-containing protein. (629 aa)
	A0A287E697	C2H2-type domain-containing protein. (445 aa)
	A0A287E9R1	RNA_pol_Rpb1_1 domain-containing protein. (86 aa)
	A0A287E9R9	Uncharacterized protein. (59 aa)
	A0A287EB28	Uncharacterized protein. (58 aa)
	A0A287EB88	RNA_pol_Rpb2_6 domain-containing protein. (82 aa)
	A0A287EBC0	RNA_pol_Rpb1_1 domain-containing protein. (92 aa)
	A0A287EBC2	Uncharacterized protein. (59 aa)
	A0A287EBS8	Uncharacterized protein. (56 aa)
	A0A287EBX7	RNA_pol_Rpb2_6 domain-containing protein. (288 aa)
	A0A287ECE3	Uncharacterized protein. (270 aa)
	A0A287EDW7	RPOL4c domain-containing protein. (178 aa)
	A0A287EHH4	Uncharacterized protein. (163 aa)
	A0A287ER97	RTR1-type domain-containing protein. (758 aa)
	rpoB	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1076 aa)
	rpoC2	DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1477 aa)
	M0Y859_HORVV	Uncharacterized protein. (402 aa)
	M0XAQ7_HORVV	WD_REPEATS_REGION domain-containing protein. (482 aa)
	M0WRM7_HORVV	TAF domain-containing protein. (547 aa)
	M0WC99_HORVV	Uncharacterized protein. (45 aa)
	M0VXG9_HORVV	CYCLIN domain-containing protein. (286 aa)
	M0VUG5_HORVV	Uncharacterized protein. (202 aa)
	M0VHI0_HORVV	Uncharacterized protein. (70 aa)
	M0UG11_HORVV	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (283 aa)
	F2EG19_HORVV	Predicted protein. (120 aa)
	F2E3L7_HORVV	Predicted protein; Belongs to the cyclin family. (486 aa)
	F2DP90_HORVV	Predicted protein. (465 aa)
	F2DA18_HORVV	Predicted protein. (210 aa)
	F2D505_HORVV	Predicted protein. (512 aa)
	F2CSA0_HORVV	Predicted protein. (119 aa)
	F2CS02_HORVV	Predicted protein. (142 aa)
	F2CQ85_HORVV	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (282 aa)
	A0A287XWN1	RPOLD domain-containing protein. (169 aa)
	A0A287XUX6	WD_REPEATS_REGION domain-containing protein. (656 aa)
	A0A287XKL0	Uncharacterized protein. (82 aa)
	A0A287XHW6	C2H2-type domain-containing protein. (693 aa)
	A0A287WYX3	Uncharacterized protein. (245 aa)
	A0A287WYX0	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (712 aa)
	A0A287WSU0	CID domain-containing protein. (982 aa)
	A0A287WI72	C2H2-type domain-containing protein. (527 aa)
	A0A287WHV6	Uncharacterized protein. (72 aa)
	A0A287VP46	Uncharacterized protein. (89 aa)
	A0A287VM05	RNA_pol_Rpb5_C domain-containing protein. (112 aa)
	A0A287ULI0	RNA_pol_Rpb5_C domain-containing protein. (100 aa)
	A0A287UJE6	Uncharacterized protein. (82 aa)
	A0A287U924	Nuclear cap-binding protein subunit 2. (277 aa)
	A0A287TQ43	Uncharacterized protein. (89 aa)
	A0A287TLD6	Uncharacterized protein. (89 aa)
	A0A287TK84	C2H2-type domain-containing protein. (535 aa)
	A0A287TGN1	Uncharacterized protein; Belongs to the cyclin family. (909 aa)
	A0A287TBA4	RNA_pol_Rpb5_C domain-containing protein. (182 aa)
	A0A287SL71	Uncharacterized protein. (319 aa)
	A0A287S9C1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1296 aa)
	A0A287S1D4	RNA_pol_Rpb2_2 domain-containing protein. (164 aa)
	A0A287S195	TFIIB-type domain-containing protein. (352 aa)
	A0A287RHX5	RNA_pol_Rpb2_2 domain-containing protein. (91 aa)
	A0A287RFF2	Uncharacterized protein. (559 aa)

Your Current Organism:

Hordeum vulgare

NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A287DVG3	A0A287DWG3	A0A287DVG3	A0A287DWG3	Uncharacterized protein.	Uncharacterized protein.	0.855
A0A287DVG3	A0A287DZ88	A0A287DVG3	A0A287DZ88	Uncharacterized protein.	CID domain-containing protein.	0.699
A0A287DVG3	A0A287E9R1	A0A287DVG3	A0A287E9R1	Uncharacterized protein.	RNA_pol_Rpb1_1 domain-containing protein.	0.855
A0A287DVG3	A0A287E9R9	A0A287DVG3	A0A287E9R9	Uncharacterized protein.	Uncharacterized protein.	0.855
A0A287DVG3	A0A287EB28	A0A287DVG3	A0A287EB28	Uncharacterized protein.	Uncharacterized protein.	0.855
A0A287DVG3	A0A287EB88	A0A287DVG3	A0A287EB88	Uncharacterized protein.	RNA_pol_Rpb2_6 domain-containing protein.	0.855
A0A287DVG3	A0A287EBC0	A0A287DVG3	A0A287EBC0	Uncharacterized protein.	RNA_pol_Rpb1_1 domain-containing protein.	0.855
A0A287DVG3	A0A287EBC2	A0A287DVG3	A0A287EBC2	Uncharacterized protein.	Uncharacterized protein.	0.855
A0A287DVG3	A0A287EBS8	A0A287DVG3	A0A287EBS8	Uncharacterized protein.	Uncharacterized protein.	0.855
A0A287DVG3	A0A287EBX7	A0A287DVG3	A0A287EBX7	Uncharacterized protein.	RNA_pol_Rpb2_6 domain-containing protein.	0.855
A0A287DVG3	A0A287ECE3	A0A287DVG3	A0A287ECE3	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A287DVG3	A0A287EDW7	A0A287DVG3	A0A287EDW7	Uncharacterized protein.	RPOL4c domain-containing protein.	0.969
A0A287DVG3	A0A287EHH4	A0A287DVG3	A0A287EHH4	Uncharacterized protein.	Uncharacterized protein.	0.919
A0A287DVG3	A0A287ER97	A0A287DVG3	A0A287ER97	Uncharacterized protein.	RTR1-type domain-containing protein.	0.951
A0A287DVG3	A0A287EX57	A0A287DVG3	A0A287EX57	Uncharacterized protein.	SHS2_Rpb7-N domain-containing protein.	0.925
A0A287DVG3	A0A287EXQ0	A0A287DVG3	A0A287EXQ0	Uncharacterized protein.	Uncharacterized protein.	0.946
A0A287DVG3	A0A287F3Y6	A0A287DVG3	A0A287F3Y6	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.948
A0A287DVG3	A0A287F4A7	A0A287DVG3	A0A287F4A7	Uncharacterized protein.	Uncharacterized protein.	0.942
A0A287DVG3	A0A287FBB0	A0A287DVG3	A0A287FBB0	Uncharacterized protein.	Uncharacterized protein.	0.925
A0A287DVG3	A0A287FEZ0	A0A287DVG3	A0A287FEZ0	Uncharacterized protein.	Uncharacterized protein.	0.855

page 1 of 838

Server load: medium (42%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About