65 items (Hordeum vulgare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A287NNY8	RNA_pol_Rpb5_C domain-containing protein. (112 aa)
	A0A287MXF6	Uncharacterized protein. (337 aa)
	A0A287MAR9	Uncharacterized protein. (605 aa)
	A0A287M8D2	Uncharacterized protein. (407 aa)
	A0A287M0P6	Uncharacterized protein. (186 aa)
	A0A287LSP9	Uncharacterized protein. (692 aa)
	A0A287LMQ8	SANTA domain-containing protein. (247 aa)
	A0A287LAS9	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (507 aa)
	A0A287KBF4	Uncharacterized protein. (582 aa)
	A0A287FGE1	Uncharacterized protein. (49 aa)
	A0A287FKJ9	RNA_pol_Rpb5_C domain-containing protein. (112 aa)
	A0A287FRG6	RPOLD domain-containing protein. (403 aa)
	A0A287FRZ6	Uncharacterized protein. (61 aa)
	A0A287G1S0	SANT domain-containing protein. (787 aa)
	A0A287G4Z7	Uncharacterized protein. (308 aa)
	A0A287GIX3	Uncharacterized protein. (639 aa)
	A0A287GN53	ENDO3c domain-containing protein. (291 aa)
	A0A287GQF4	ENDO3c domain-containing protein. (343 aa)
	A0A287H8S3	Uncharacterized protein. (198 aa)
	A0A287HDN1	Uncharacterized protein. (215 aa)
	A0A287HDR4	Uncharacterized protein. (75 aa)
	A0A287HG46	RNA_pol_Rpb5_C domain-containing protein. (112 aa)
	A0A287I9Y8	SANTA domain-containing protein. (486 aa)
	A0A287IA11	SANTA domain-containing protein. (520 aa)
	A0A287IA19	Uncharacterized protein. (161 aa)
	A0A287KB68	CYCLIN domain-containing protein. (154 aa)
	A0A287IA29	SANTA domain-containing protein. (335 aa)
	A0A287IFV7	SANTA domain-containing protein. (470 aa)
	A0A287II04	Uncharacterized protein. (72 aa)
	A0A287IPU8	SANTA domain-containing protein. (66 aa)
	A0A287IPZ3	Uncharacterized protein. (276 aa)
	A0A287IQ06	Uncharacterized protein. (204 aa)
	A0A287K4V0	RNA_pol_Rpb1_1 domain-containing protein. (148 aa)
	A0A287KB16	BRF1 domain-containing protein. (130 aa)
	A0A287VM05	RNA_pol_Rpb5_C domain-containing protein. (112 aa)
	A0A287WJP5	Uncharacterized protein. (569 aa)
	A0A287X299	Uncharacterized protein. (689 aa)
	A0A287X9J7	Uncharacterized protein. (321 aa)
	F2CS02_HORVV	Predicted protein. (142 aa)
	F2DA18_HORVV	Predicted protein. (210 aa)
	F2DFJ1_HORVV	Predicted protein. (994 aa)
	M0VUG5_HORVV	Uncharacterized protein. (202 aa)
	M0WGW3_HORVV	Uncharacterized protein. (908 aa)
	M0XAP7_HORVV	SANT domain-containing protein. (264 aa)
	A0A287TRC6	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1157 aa)
	A0A287TNT3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1425 aa)
	A0A287TBA4	RNA_pol_Rpb5_C domain-containing protein. (182 aa)
	A0A287SH81	Uncharacterized protein. (208 aa)
	A0A287S0X6	RPOLA_N domain-containing protein. (217 aa)
	A0A287RK45	Uncharacterized protein. (606 aa)
	A0A287QZJ3	Uncharacterized protein. (228 aa)
	A0A287QVX8	Uncharacterized protein. (108 aa)
	A0A287PY68	RNA_pol_Rpb1_2 domain-containing protein. (73 aa)
	A0A287N888	Uncharacterized protein. (387 aa)
	A0A287DVG3	Uncharacterized protein. (69 aa)
	A0A287DVM0	SANTA domain-containing protein. (112 aa)
	A0A287ECE3	Uncharacterized protein. (270 aa)
	A0A287EWM0	Uncharacterized protein. (376 aa)
	A0A287EYL4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (763 aa)
	A0A287F4A7	Uncharacterized protein. (299 aa)
	A0A287F891	RNA_pol_Rpb1_1 domain-containing protein. (148 aa)
	A0A287UG94	RPOL9 domain-containing protein. (95 aa)
	A0A287ULI0	RNA_pol_Rpb5_C domain-containing protein. (100 aa)
	A0A287UY45	RNA_pol_Rpb1_1 domain-containing protein. (161 aa)
	A0A287VIP8	RPOLA_N domain-containing protein. (228 aa)

Your Current Organism:

Hordeum vulgare

NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A287DVG3	A0A287ECE3	A0A287DVG3	A0A287ECE3	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A287DVG3	A0A287EWM0	A0A287DVG3	A0A287EWM0	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A287DVG3	A0A287EYL4	A0A287DVG3	A0A287EYL4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.929
A0A287DVG3	A0A287F4A7	A0A287DVG3	A0A287F4A7	Uncharacterized protein.	Uncharacterized protein.	0.942
A0A287DVG3	A0A287F891	A0A287DVG3	A0A287F891	Uncharacterized protein.	RNA_pol_Rpb1_1 domain-containing protein.	0.929
A0A287DVG3	A0A287FGE1	A0A287DVG3	A0A287FGE1	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A287DVG3	A0A287FKJ9	A0A287DVG3	A0A287FKJ9	Uncharacterized protein.	RNA_pol_Rpb5_C domain-containing protein.	0.933
A0A287DVG3	A0A287FRG6	A0A287DVG3	A0A287FRG6	Uncharacterized protein.	RPOLD domain-containing protein.	0.971
A0A287DVG3	A0A287G1S0	A0A287DVG3	A0A287G1S0	Uncharacterized protein.	SANT domain-containing protein.	0.910
A0A287DVG3	A0A287G4Z7	A0A287DVG3	A0A287G4Z7	Uncharacterized protein.	Uncharacterized protein.	0.961
A0A287DVG3	A0A287GIX3	A0A287DVG3	A0A287GIX3	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A287DVG3	A0A287H8S3	A0A287DVG3	A0A287H8S3	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A287DVG3	A0A287HG46	A0A287DVG3	A0A287HG46	Uncharacterized protein.	RNA_pol_Rpb5_C domain-containing protein.	0.933
A0A287DVG3	A0A287II04	A0A287DVG3	A0A287II04	Uncharacterized protein.	Uncharacterized protein.	0.960
A0A287DVG3	A0A287IPZ3	A0A287DVG3	A0A287IPZ3	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A287DVG3	A0A287IQ06	A0A287DVG3	A0A287IQ06	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A287DVG3	A0A287K4V0	A0A287DVG3	A0A287K4V0	Uncharacterized protein.	RNA_pol_Rpb1_1 domain-containing protein.	0.929
A0A287DVG3	A0A287KB16	A0A287DVG3	A0A287KB16	Uncharacterized protein.	BRF1 domain-containing protein.	0.917
A0A287DVG3	A0A287KB68	A0A287DVG3	A0A287KB68	Uncharacterized protein.	CYCLIN domain-containing protein.	0.917
A0A287DVG3	A0A287KBF4	A0A287DVG3	A0A287KBF4	Uncharacterized protein.	Uncharacterized protein.	0.917

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