53 items (Macrophomina phaseolina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MPH_12122	SEC7-like protein. (1610 aa)
	MPH_08098	DH domain-containing protein. (1841 aa)
	MPH_09895	Uncharacterized protein. (176 aa)
	MPH_09971	Uncharacterized protein. (471 aa)
	MPH_00801	Ras-like guanine nucleotide exchange factor. (1256 aa)
	MPH_13633	Ras-like guanine nucleotide exchange factor. (1490 aa)
	MPH_09508	Alpha/beta hydrolase fold-1. (366 aa)
	MPH_02098	HR1 repeat rho-binding protein. (1293 aa)
	MPH_11980	Rgp1. (718 aa)
	MPH_10248	Ribosome maturation protein SBDS. (302 aa)
	MPH_10635	Uncharacterized protein. (385 aa)
	MPH_02513	Regulator of chromosome condensation RCC1. (603 aa)
	MPH_02818	Uncharacterized protein. (530 aa)
	MPH_03345	Uncharacterized protein. (179 aa)
	MPH_03294	Ribosome control protein 1. (1156 aa)
	MPH_11669	Transport protein Trs120. (1376 aa)
	MPH_14190	Ribosome control protein 1. (106 aa)
	MPH_09861	Uncharacterized protein. (1007 aa)
	MPH_10024	Uncharacterized protein. (157 aa)
	MPH_13088	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (166 aa)
	MPH_04559	Trafficking protein particle complex subunit BET3. (191 aa)
	MPH_03575	Armadillo-like helical. (1688 aa)
	MPH_01634	Alpha/beta hydrolase fold-1. (393 aa)
	MPH_00495	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (119 aa)
	MPH_00812	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (112 aa)
	MPH_03132	Translation elongation factor EF1B beta/delta chains conserved site; Belongs to the EF-1-beta/EF-1-delta family. (229 aa)
	MPH_03900	Uncharacterized protein. (227 aa)
	MPH_10023	Uncharacterized protein. (233 aa)
	MPH_11259	GDPGTP exchange factor Sec2p. (717 aa)
	MPH_11068	Uncharacterized protein. (162 aa)
	MPH_06017	Vacuolar sorting protein 9. (779 aa)
	MPH_11938	SEC7-like protein. (1405 aa)
	MPH_01662	Uncharacterized protein. (1527 aa)
	MPH_12244	Ran-interacting Mog1 protein. (194 aa)
	MPH_02110	Vacuolar sorting protein 9. (724 aa)
	GET3	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...] (341 aa)
	MPH_04692	Uncharacterized protein; Belongs to the DOCK family. (2042 aa)
	MPH_07568	Uncharacterized protein. (1225 aa)
	MPH_03296	Proteinase inhibitor I13 potato inhibitor I. (79 aa)
	MPH_05092	eIF4-gamma/eIF5/eIF2-epsilon. (714 aa)
	MPH_02559	Uncharacterized protein. (587 aa)
	MPH_08620	SEC7-like protein. (1994 aa)
	MPH_03060	Protein kinase domain-containing protein. (608 aa)
	MPH_00868	Citron-like protein. (1015 aa)
	MPH_00749	DENNdomain-containing protein. (1113 aa)
	MPH_06369	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (239 aa)
	MPH_00630	AB hydrolase-1 domain-containing protein. (417 aa)
	MPH_06076	SEC7-like protein. (1390 aa)
	MPH_05790	Ras-like guanine nucleotide exchange factor. (1141 aa)
	MPH_05201	Uncharacterized protein. (1818 aa)
	MPH_01004	Ras-like guanine nucleotide exchange factor. (847 aa)
	MPH_06822	Uncharacterized protein. (763 aa)
	MPH_07690	Uncharacterized protein. (1714 aa)

Your Current Organism:

Macrophomina phaseolina

NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GET3	MPH_00812	K2S0L7	K2SAH5	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.843
MPH_00495	MPH_01662	K2SB45	K2S280	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.999
MPH_00495	MPH_03060	K2SB45	K2SB89	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Protein kinase domain-containing protein.	0.977
MPH_00495	MPH_04559	K2SB45	K2SN13	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit BET3.	0.999
MPH_00495	MPH_06369	K2SB45	K2SHS1	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.999
MPH_00495	MPH_11669	K2SB45	K2R9Q6	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Transport protein Trs120.	0.998
MPH_00495	MPH_13088	K2SB45	K2QJ34	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
MPH_00630	MPH_11068	K2SHY3	K2S4F9	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.622
MPH_00801	MPH_03900	K2RH49	K2S907	Ras-like guanine nucleotide exchange factor.	Uncharacterized protein.	0.401
MPH_00801	MPH_04692	K2RH49	K2RZ67	Ras-like guanine nucleotide exchange factor.	Uncharacterized protein; Belongs to the DOCK family.	0.457
MPH_00801	MPH_08098	K2RH49	K2RJJ4	Ras-like guanine nucleotide exchange factor.	DH domain-containing protein.	0.401
MPH_00801	MPH_09861	K2RH49	K2QTJ5	Ras-like guanine nucleotide exchange factor.	Uncharacterized protein.	0.577
MPH_00801	MPH_11068	K2RH49	K2S4F9	Ras-like guanine nucleotide exchange factor.	Uncharacterized protein.	0.567
MPH_00812	GET3	K2SAH5	K2S0L7	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.843
MPH_01634	MPH_11068	K2SWU2	K2S4F9	Alpha/beta hydrolase fold-1.	Uncharacterized protein.	0.622
MPH_01662	MPH_00495	K2S280	K2SB45	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
MPH_01662	MPH_03060	K2S280	K2SB89	Uncharacterized protein.	Protein kinase domain-containing protein.	0.972
MPH_01662	MPH_04559	K2S280	K2SN13	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.999
MPH_01662	MPH_06369	K2S280	K2SHS1	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.999
MPH_01662	MPH_11259	K2S280	K2S4U8	Uncharacterized protein.	GDPGTP exchange factor Sec2p.	0.411