36 items (Macrophomina phaseolina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MPH_08150	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
	MPH_08174	EPS15-like protein. (1415 aa)
	MPH_07886	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (363 aa)
	MPH_06866	Amphiphysin. (261 aa)
	MPH_06385	DUF2013 domain-containing protein. (440 aa)
	MPH_11846	Coronin; Belongs to the WD repeat coronin family. (607 aa)
	MPH_01875	Actin-like protein; Belongs to the actin family. (389 aa)
	MPH_01640	EPS15-like protein. (1368 aa)
	MPH_01494	Actinin-type actin-binding conserved site. (651 aa)
	MPH_11185	I/LWEQ domain-containing protein. (1048 aa)
	MPH_00353	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDC5/Polo subfamily. (2032 aa)
	MPH_00306	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (829 aa)
	MPH_08302	Calponin-homology (CH) domain-containing protein. (651 aa)
	MPH_10075	VHS domain-containing protein. (417 aa)
	MPH_08625	Adenylyl cyclase-associated protein; Belongs to the CAP family. (551 aa)
	MPH_11132	Uncharacterized protein. (659 aa)
	MPH_08155	Arf GTPase activating protein. (660 aa)
	MPH_10072	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (209 aa)
	MPH_09998	SH3 domain-containing protein. (416 aa)
	MPH_09813	Actin-binding cofilin/tropomyosin type. (129 aa)
	MPH_04786	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (169 aa)
	MPH_08504	EPS15-like protein. (403 aa)
	MPH_04757	EVH1 domain-containing protein. (494 aa)
	MPH_07144	SH3 domain-containing protein. (1245 aa)
	MPH_03783	Inositol polyphosphate-related phosphatase. (824 aa)
	MPH_03416	Actin-like protein; Belongs to the actin family. (439 aa)
	MPH_01876	Fps/Fes/Fer/CIP4-like protein. (728 aa)
	MPH_10073	Uncharacterized protein. (679 aa)
	MPH_03760	Dynamin_M domain-containing protein. (334 aa)
	MPH_03759	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (292 aa)
	MPH_08730	BTB/POZ-like protein. (342 aa)
	MPH_06921	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (189 aa)
	MPH_00062	WD_REPEATS_REGION domain-containing protein. (566 aa)
	MPH_01912	Uncharacterized protein. (437 aa)
	MPH_00739	Neutrophil cytosol factor 2 p67phox. (809 aa)
	MPH_00696	Uncharacterized protein. (1202 aa)

Your Current Organism:

Macrophomina phaseolina

NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPH_00062	MPH_00306	K2SJL4	K2RIA8	WD_REPEATS_REGION domain-containing protein.	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.934
MPH_00062	MPH_00696	K2SJL4	K2SZC1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.838
MPH_00062	MPH_00739	K2SJL4	K2SYX7	WD_REPEATS_REGION domain-containing protein.	Neutrophil cytosol factor 2 p67phox.	0.440
MPH_00062	MPH_01494	K2SJL4	K2RFC7	WD_REPEATS_REGION domain-containing protein.	Actinin-type actin-binding conserved site.	0.535
MPH_00062	MPH_01875	K2SJL4	K2RE33	WD_REPEATS_REGION domain-containing protein.	Actin-like protein; Belongs to the actin family.	0.846
MPH_00062	MPH_03416	K2SJL4	K2S3I0	WD_REPEATS_REGION domain-containing protein.	Actin-like protein; Belongs to the actin family.	0.931
MPH_00062	MPH_07886	K2SJL4	K2QYI5	WD_REPEATS_REGION domain-containing protein.	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family.	0.425
MPH_00062	MPH_08302	K2SJL4	K2RIN5	WD_REPEATS_REGION domain-containing protein.	Calponin-homology (CH) domain-containing protein.	0.771
MPH_00062	MPH_08625	K2SJL4	K2RMY3	WD_REPEATS_REGION domain-containing protein.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.836
MPH_00062	MPH_09813	K2SJL4	K2RS00	WD_REPEATS_REGION domain-containing protein.	Actin-binding cofilin/tropomyosin type.	0.576
MPH_00062	MPH_10072	K2SJL4	K2RRH2	WD_REPEATS_REGION domain-containing protein.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.642
MPH_00062	MPH_10073	K2SJL4	K2S7I4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.642
MPH_00062	MPH_11846	K2SJL4	K2R9J5	WD_REPEATS_REGION domain-containing protein.	Coronin; Belongs to the WD repeat coronin family.	0.658
MPH_00306	MPH_00062	K2RIA8	K2SJL4	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	WD_REPEATS_REGION domain-containing protein.	0.934
MPH_00306	MPH_00696	K2RIA8	K2SZC1	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.878
MPH_00306	MPH_00739	K2RIA8	K2SYX7	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Neutrophil cytosol factor 2 p67phox.	0.867
MPH_00306	MPH_01494	K2RIA8	K2RFC7	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Actinin-type actin-binding conserved site.	0.932
MPH_00306	MPH_01875	K2RIA8	K2RE33	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Actin-like protein; Belongs to the actin family.	0.869
MPH_00306	MPH_03416	K2RIA8	K2S3I0	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Actin-like protein; Belongs to the actin family.	0.925
MPH_00306	MPH_04757	K2RIA8	K2RZE3	WASH complex F-actin capping protein beta subunit; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	EVH1 domain-containing protein.	0.643