STRINGSTRING
MPH_13151 MPH_13151 MPH_12597 MPH_12597 MPH_12255 MPH_12255 MPH_10886 MPH_10886 MPH_10257 MPH_10257 MPH_08726 MPH_08726 MPH_08385 MPH_08385 YTM1 YTM1 MPH_06975 MPH_06975 MPH_05994 MPH_05994 MPH_05688 MPH_05688 MPH_04943 MPH_04943 MPH_13651 MPH_13651 MPH_11801 MPH_11801 MPH_03647 MPH_03647 MPH_03134 MPH_03134 MPH_03194 MPH_03194 MPH_03435 MPH_03435 MPH_12587 MPH_12587 MPH_11381 MPH_11381 NOP7 NOP7 MPH_00951 MPH_00951 MPH_10773 MPH_10773 MPH_00632 MPH_00632 MPH_00435 MPH_00435 MPH_00150 MPH_00150 MPH_10055 MPH_10055 MPH_07843 MPH_07843 MPH_07848 MPH_07848 MPH_09418 MPH_09418 MPH_12183 MPH_12183 MPH_07409 MPH_07409 MPH_11762 MPH_11762 MPH_07001 MPH_07001 MPH_06977 MPH_06977 MPH_08567 MPH_08567 MPH_06304 MPH_06304 MPH_06011 MPH_06011 MPH_10329 MPH_10329 MPH_05655 MPH_05655 MPH_05566 MPH_05566 MPH_04210 MPH_04210 MPH_04295 MPH_04295 MPH_06303 MPH_06303 MPH_05679 MPH_05679 MPH_08224 MPH_08224 MPH_08152 MPH_08152 MPH_03332 MPH_03332 MPH_13155 MPH_13155 MPH_13023 MPH_13023 MPH_02380 MPH_02380 MPH_03898 MPH_03898 MPH_01652 MPH_01652 MPH_05895 MPH_05895 MPH_03300 MPH_03300 MPH_05205 MPH_05205 MPH_00594 MPH_00594 MPH_02514 MPH_02514 MPH_10668 MPH_10668 MPH_04306 MPH_04306 MPH_01621 MPH_01621 MPH_01565 MPH_01565 MPH_09582 MPH_09582 MPH_03500 MPH_03500 ERB1 ERB1 MPH_03257 MPH_03257 MPH_00863 MPH_00863 NAT10 NAT10 MPH_02381 MPH_02381 MPH_02284 MPH_02284 MPH_02086 MPH_02086 MPH_02039 MPH_02039 MPH_01822 MPH_01822 MPH_07035 MPH_07035 MPH_06870 MPH_06870 MPH_00665 MPH_00665 MPH_00527 MPH_00527 MPH_00168 MPH_00168 MPH_05319 MPH_05319 MPH_05068 MPH_05068 MPH_04926 MPH_04926 MPH_04287 MPH_04287 MPH_03766 MPH_03766 SPB1 SPB1 MPH_00945 MPH_00945 MPH_00950 MPH_00950 MPH_00429 MPH_00429 MPH_10270 MPH_10270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MPH_13151WD_REPEATS_REGION domain-containing protein. (930 aa)
MPH_12597Uncharacterized protein. (467 aa)
MPH_12255HAD_SAK_1 domain-containing protein. (540 aa)
MPH_10886Nop domain-containing protein. (563 aa)
MPH_10257Armadillo-like helical. (1796 aa)
MPH_08726Ribosomal protein L1. (388 aa)
MPH_08385WD_REPEATS_REGION domain-containing protein. (387 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (493 aa)
MPH_06975Anticodon-binding protein. (308 aa)
MPH_05994RNA helicase. (631 aa)
MPH_0568840S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (202 aa)
MPH_04943Down-regulated-in-metastasis protein. (2593 aa)
MPH_13651RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (737 aa)
MPH_11801Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4786 aa)
MPH_03647Uncharacterized protein. (282 aa)
MPH_03134Sas10/Utp3/C1D. (661 aa)
MPH_03194Nucleolar Nop52. (245 aa)
MPH_03435RNA helicase. (833 aa)
MPH_12587K-like protein. (262 aa)
MPH_11381NUC153 domain-containing protein. (747 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (667 aa)
MPH_00951Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (685 aa)
MPH_10773ATPase AAA+ type core. (726 aa)
MPH_00632Uncharacterized protein. (243 aa)
MPH_00435CCAAT-binding factor. (548 aa)
MPH_00150rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (379 aa)
MPH_10055Bud-site selection protein BUD22. (454 aa)
MPH_07843WD_REPEATS_REGION domain-containing protein. (396 aa)
MPH_07848WD_REPEATS_REGION domain-containing protein. (887 aa)
MPH_09418RIO kinase. (459 aa)
MPH_12183U3 small nucleolar RNA-associated protein 22. (1191 aa)
MPH_07409Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (587 aa)
MPH_11762WD_REPEATS_REGION domain-containing protein. (555 aa)
MPH_07001Low temperature viability protein. (447 aa)
MPH_06977Uncharacterized protein. (357 aa)
MPH_08567HR1 repeat rho-binding protein. (1166 aa)
MPH_06304Las1-like protein. (428 aa)
MPH_06011Uncharacterized protein. (1803 aa)
MPH_10329Fibrillarin. (275 aa)
MPH_05655KRR1 interacting protein 1 subgroup. (632 aa)
MPH_05566Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (656 aa)
MPH_04210Uncharacterized protein. (297 aa)
MPH_04295High mobility group HMG1/HMG2. (429 aa)
MPH_06303Uncharacterized protein. (370 aa)
MPH_05679Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (265 aa)
MPH_08224Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (202 aa)
MPH_08152Nucleotide binding protein PINc. (194 aa)
MPH_03332Uncharacterized protein. (336 aa)
MPH_13155Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (265 aa)
MPH_13023WD_REPEATS_REGION domain-containing protein. (396 aa)
MPH_02380Brix domain-containing protein. (434 aa)
MPH_0389820S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (470 aa)
MPH_0165260S ribosomal subunit assembly/export protein LOC1. (175 aa)
MPH_05895Nop domain-containing protein. (521 aa)
MPH_03300PUM-HD domain-containing protein. (700 aa)
MPH_05205Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (256 aa)
MPH_00594Nop14-like protein. (843 aa)
MPH_02514Uncharacterized protein. (1051 aa)
MPH_10668RNA-processing protein HAT helix. (444 aa)
MPH_04306Small-subunit processome Utp11. (206 aa)
MPH_01621Mak16 protein. (286 aa)
MPH_01565Helicase. (1248 aa)
MPH_09582Small-subunit processome Utp14. (982 aa)
MPH_03500Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (383 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (803 aa)
MPH_03257GTP-binding domain HSR1-related protein. (528 aa)
MPH_00863U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (629 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1064 aa)
MPH_02381RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (363 aa)
MPH_02284Anticodon-binding protein. (298 aa)
MPH_02086WD_REPEATS_REGION domain-containing protein. (1001 aa)
MPH_02039Bystin. (500 aa)
MPH_01822Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
MPH_07035Eukaryotic rRNA processing. (412 aa)
MPH_06870Anticodon-binding protein. (419 aa)
MPH_00665WD_REPEATS_REGION domain-containing protein. (1030 aa)
MPH_00527RNA 3'-terminal phosphate cyclase. (403 aa)
MPH_00168Sas10/Utp3/C1D. (421 aa)
MPH_05319rRNA-processing protein EFG1. (280 aa)
MPH_05068Ribosomal protein S4/S9. (188 aa)
MPH_04926Uncharacterized protein. (627 aa)
MPH_04287Uncharacterized protein. (836 aa)
MPH_03766WD_REPEATS_REGION domain-containing protein. (891 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (831 aa)
MPH_00945Ribosome biogenesis protein BMS1/TSR1. (609 aa)
MPH_0095060S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
MPH_00429Uncharacterized protein. (156 aa)
MPH_10270RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (791 aa)
Your Current Organism:
Macrophomina phaseolina
NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6
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