STRINGSTRING
MPH_03739 MPH_03739 MPH_06944 MPH_06944 MPH_05100 MPH_05100 MPH_10519 MPH_10519 MPH_07634 MPH_07634 MPH_07381 MPH_07381 MPH_02594 MPH_02594
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MPH_03739Ubiquitin-associated/translation elongation factor EF1B. (959 aa)
MPH_06944Clathrin adaptor mu subunit; Belongs to the adaptor complexes medium subunit family. (286 aa)
MPH_05100AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
MPH_10519Synaptojanin. (1081 aa)
MPH_07634Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (154 aa)
MPH_07381ENTH/VHS domain-containing protein. (604 aa)
MPH_02594AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (958 aa)
Your Current Organism:
Macrophomina phaseolina
NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6
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