STRINGSTRING
MPH_00429 MPH_00429 MPH_00641 MPH_00641 MPH_00950 MPH_00950 MPH_00945 MPH_00945 MPH_01959 MPH_01959 SPB1 SPB1 MPH_04926 MPH_04926 MPH_05068 MPH_05068 MPH_05211 MPH_05211 MPH_05319 MPH_05319 MPH_05672 MPH_05672 MPH_00527 MPH_00527 MPH_00665 MPH_00665 MPH_02039 MPH_02039 MPH_02086 MPH_02086 MPH_02284 MPH_02284 MPH_08085 MPH_08085 NAT10 NAT10 MPH_00863 MPH_00863 MPH_03500 MPH_03500 MPH_09582 MPH_09582 MPH_01565 MPH_01565 MPH_01621 MPH_01621 MPH_04306 MPH_04306 MPH_10668 MPH_10668 MPH_02514 MPH_02514 MPH_00594 MPH_00594 MPH_05179 MPH_05179 MPH_05370 MPH_05370 MPH_00773 MPH_00773 MPH_05718 MPH_05718 MPH_01315 MPH_01315 MPH_01652 MPH_01652 MPH_03898 MPH_03898 MPH_02065 MPH_02065 MPH_13023 MPH_13023 MPH_13155 MPH_13155 MPH_03432 MPH_03432 MPH_08152 MPH_08152 MPH_08224 MPH_08224 MPH_05808 MPH_05808 MPH_04210 MPH_04210 MPH_07202 MPH_07202 MPH_06011 MPH_06011 MPH_11082 MPH_11082 MPH_08856 MPH_08856 MPH_06977 MPH_06977 MPH_07001 MPH_07001 MPH_11762 MPH_11762 MPH_11792 MPH_11792 MPH_12183 MPH_12183 MPH_09418 MPH_09418 MPH_07843 MPH_07843 MPH_00435 MPH_00435 MPH_00632 MPH_00632 MPH_03647 MPH_03647 MPH_03134 MPH_03134 MPH_03194 MPH_03194 MPH_11201 MPH_11201 MPH_12587 MPH_12587 MPH_10393 MPH_10393 MPH_11688 MPH_11688 MPH_09733 MPH_09733 MPH_11381 MPH_11381 MPH_03435 MPH_03435 MPH_11406 MPH_11406 MPH_01288 MPH_01288 MPH_00951 MPH_00951 MPH_00725 MPH_00725 MPH_10705 MPH_10705 MPH_00683 MPH_00683 MPH_06975 MPH_06975 MPH_05994 MPH_05994 MPH_04943 MPH_04943 MPH_04273 MPH_04273 MPH_13651 MPH_13651
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MPH_00429Uncharacterized protein. (156 aa)
MPH_00641Nucleotide-binding alpha-beta plait. (436 aa)
MPH_0095060S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
MPH_00945Ribosome biogenesis protein BMS1/TSR1. (609 aa)
MPH_01959ATPase AAA+ type core. (544 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (831 aa)
MPH_04926Uncharacterized protein. (627 aa)
MPH_05068Ribosomal protein S4/S9. (188 aa)
MPH_05211CCAAT-binding factor. (831 aa)
MPH_05319rRNA-processing protein EFG1. (280 aa)
MPH_05672Ribosomal protein L24e. (160 aa)
MPH_00527RNA 3'-terminal phosphate cyclase. (403 aa)
MPH_00665WD_REPEATS_REGION domain-containing protein. (1030 aa)
MPH_02039Bystin. (500 aa)
MPH_02086WD_REPEATS_REGION domain-containing protein. (1001 aa)
MPH_02284Anticodon-binding protein. (298 aa)
MPH_08085Uncharacterized protein. (509 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1064 aa)
MPH_00863U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (629 aa)
MPH_03500Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (383 aa)
MPH_09582Small-subunit processome Utp14. (982 aa)
MPH_01565Helicase. (1248 aa)
MPH_01621Mak16 protein. (286 aa)
MPH_04306Small-subunit processome Utp11. (206 aa)
MPH_10668RNA-processing protein HAT helix. (444 aa)
MPH_02514Uncharacterized protein. (1051 aa)
MPH_00594Nop14-like protein. (843 aa)
MPH_05179Casein kinase II regulatory subunit. (773 aa)
MPH_05370RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (412 aa)
MPH_00773U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (705 aa)
MPH_05718Uncharacterized protein. (703 aa)
MPH_01315RRM domain-containing protein. (445 aa)
MPH_0165260S ribosomal subunit assembly/export protein LOC1. (175 aa)
MPH_0389820S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (470 aa)
MPH_02065Ribosome biogenesis protein Nop16. (226 aa)
MPH_13023WD_REPEATS_REGION domain-containing protein. (396 aa)
MPH_13155Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (265 aa)
MPH_03432ATP-dependent RNA helicase DBP10. (913 aa)
MPH_08152Nucleotide binding protein PINc. (194 aa)
MPH_08224Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (202 aa)
MPH_05808Uncharacterized protein. (977 aa)
MPH_04210Uncharacterized protein. (297 aa)
MPH_07202Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (574 aa)
MPH_06011Uncharacterized protein. (1803 aa)
MPH_11082Uncharacterized protein. (229 aa)
MPH_08856Uncharacterized protein. (601 aa)
MPH_06977Uncharacterized protein. (357 aa)
MPH_07001Low temperature viability protein. (447 aa)
MPH_11762WD_REPEATS_REGION domain-containing protein. (555 aa)
MPH_11792Small-subunit processome Utp12. (457 aa)
MPH_12183U3 small nucleolar RNA-associated protein 22. (1191 aa)
MPH_09418RIO kinase. (459 aa)
MPH_07843WD_REPEATS_REGION domain-containing protein. (396 aa)
MPH_00435CCAAT-binding factor. (548 aa)
MPH_00632Uncharacterized protein. (243 aa)
MPH_03647Uncharacterized protein. (282 aa)
MPH_03134Sas10/Utp3/C1D. (661 aa)
MPH_03194Nucleolar Nop52. (245 aa)
MPH_11201RRM domain-containing protein. (351 aa)
MPH_12587K-like protein. (262 aa)
MPH_10393RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (482 aa)
MPH_11688Uncharacterized protein. (341 aa)
MPH_09733Uncharacterized protein. (874 aa)
MPH_11381NUC153 domain-containing protein. (747 aa)
MPH_03435RNA helicase. (833 aa)
MPH_11406TRAUB domain-containing protein. (501 aa)
MPH_01288Ribosomal protein S23 eukaryotic/archaeal; Belongs to the universal ribosomal protein uS12 family. (145 aa)
MPH_00951Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (685 aa)
MPH_00725Brix domain-containing protein. (268 aa)
MPH_10705RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (523 aa)
MPH_0068360S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
MPH_06975Anticodon-binding protein. (308 aa)
MPH_05994RNA helicase. (631 aa)
MPH_04943Down-regulated-in-metastasis protein. (2593 aa)
MPH_04273Helicase. (773 aa)
MPH_13651RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (737 aa)
Your Current Organism:
Macrophomina phaseolina
NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6
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