9 items (Macrophomina phaseolina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MPH_11420	Uncharacterized protein. (633 aa)
	MPH_02098	HR1 repeat rho-binding protein. (1293 aa)
	MPH_11238	WD_REPEATS_REGION domain-containing protein. (1364 aa)
	MPH_04925	Zinc finger Zim17-type. (307 aa)
	MPH_00822	WD_REPEATS_REGION domain-containing protein. (501 aa)
	MPH_02714	Uncharacterized protein. (347 aa)
	MPH_01669	Uncharacterized protein. (726 aa)
	MPH_01064	Stress-activated map kinase interacting 1. (831 aa)
	MPH_00861	HbrB-like protein. (739 aa)

Your Current Organism:

Macrophomina phaseolina

NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPH_00822	MPH_00861	K2SAI5	K2SZ95	WD_REPEATS_REGION domain-containing protein.	HbrB-like protein.	0.782
MPH_00822	MPH_01064	K2SAI5	K2SYH3	WD_REPEATS_REGION domain-containing protein.	Stress-activated map kinase interacting 1.	0.999
MPH_00822	MPH_02098	K2SAI5	K2RDJ2	WD_REPEATS_REGION domain-containing protein.	HR1 repeat rho-binding protein.	0.999
MPH_00822	MPH_04925	K2SAI5	K2S5P2	WD_REPEATS_REGION domain-containing protein.	Zinc finger Zim17-type.	0.923
MPH_00822	MPH_11238	K2SAI5	K2S4T3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
MPH_00861	MPH_00822	K2SZ95	K2SAI5	HbrB-like protein.	WD_REPEATS_REGION domain-containing protein.	0.782
MPH_00861	MPH_01064	K2SZ95	K2SYH3	HbrB-like protein.	Stress-activated map kinase interacting 1.	0.782
MPH_00861	MPH_02098	K2SZ95	K2RDJ2	HbrB-like protein.	HR1 repeat rho-binding protein.	0.817
MPH_00861	MPH_04925	K2SZ95	K2S5P2	HbrB-like protein.	Zinc finger Zim17-type.	0.640
MPH_00861	MPH_11238	K2SZ95	K2S4T3	HbrB-like protein.	WD_REPEATS_REGION domain-containing protein.	0.428
MPH_01064	MPH_00822	K2SYH3	K2SAI5	Stress-activated map kinase interacting 1.	WD_REPEATS_REGION domain-containing protein.	0.999
MPH_01064	MPH_00861	K2SYH3	K2SZ95	Stress-activated map kinase interacting 1.	HbrB-like protein.	0.782
MPH_01064	MPH_02098	K2SYH3	K2RDJ2	Stress-activated map kinase interacting 1.	HR1 repeat rho-binding protein.	0.999
MPH_01064	MPH_04925	K2SYH3	K2S5P2	Stress-activated map kinase interacting 1.	Zinc finger Zim17-type.	0.924
MPH_01064	MPH_11238	K2SYH3	K2S4T3	Stress-activated map kinase interacting 1.	WD_REPEATS_REGION domain-containing protein.	0.696
MPH_01064	MPH_11420	K2SYH3	K2S3V8	Stress-activated map kinase interacting 1.	Uncharacterized protein.	0.403
MPH_01669	MPH_11420	K2SX03	K2S3V8	Uncharacterized protein.	Uncharacterized protein.	0.400
MPH_02098	MPH_00822	K2RDJ2	K2SAI5	HR1 repeat rho-binding protein.	WD_REPEATS_REGION domain-containing protein.	0.999
MPH_02098	MPH_00861	K2RDJ2	K2SZ95	HR1 repeat rho-binding protein.	HbrB-like protein.	0.817
MPH_02098	MPH_01064	K2RDJ2	K2SYH3	HR1 repeat rho-binding protein.	Stress-activated map kinase interacting 1.	0.999