37 items (Macrophomina phaseolina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MPH_01648	Amidohydro-rel domain-containing protein. (307 aa)
	MPH_07160	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (723 aa)
	MPH_00018	Uncharacterized protein. (182 aa)
	MPH_03464	Cerato-platanin. (143 aa)
	MPH_00200	Heterokaryon incompatibility. (767 aa)
	MPH_02594	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (958 aa)
	MPH_08855	PH domain-containing protein. (580 aa)
	MPH_06944	Clathrin adaptor mu subunit; Belongs to the adaptor complexes medium subunit family. (286 aa)
	MPH_05100	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
	MPH_11796	Heterokaryon incompatibility. (369 aa)
	MPH_10470	Transcription factor fungi. (527 aa)
	MPH_14143	Dihydroorotase conserved site. (184 aa)
	MPH_11283	Uncharacterized protein. (218 aa)
	MPH_13653	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (353 aa)
	MPH_13560	Uncharacterized protein. (242 aa)
	MPH_00528	Zn(2)-C6 fungal-type domain-containing protein. (887 aa)
	SLX4	Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (1089 aa)
	MPH_09890	Amidohydrolase 1. (443 aa)
	MPH_09702	Amidohydrolase 1. (537 aa)
	MPH_08150	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
	MPH_10821	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (452 aa)
	MPH_07634	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (154 aa)
	MPH_05369	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (480 aa)
	MPH_03774	Uncharacterized protein. (413 aa)
	MPH_03151	Ubiquitin. (204 aa)
	MPH_05316	Transcription factor fungi. (362 aa)
	MPH_13561	Uncharacterized protein. (101 aa)
	MPH_04893	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (741 aa)
	MPH_04757	EVH1 domain-containing protein. (494 aa)
	MPH_06768	Actin-binding cofilin/tropomyosin type; Belongs to the actin-binding proteins ADF family. (161 aa)
	MPH_06675	Heterokaryon incompatibility. (250 aa)
	MPH_11083	Ras GTPase. (199 aa)
	MPH_02727	Amidohydrolase 1. (536 aa)
	MPH_00203	Amidohydrolase 1. (435 aa)
	MPH_10325	Protein kinase domain-containing protein. (669 aa)
	MPH_10104	Amidohydrolase 1. (307 aa)
	MPH_09551	Ubiquitin. (305 aa)

Your Current Organism:

Macrophomina phaseolina

NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPH_00018	MPH_00200	K2SJP3	K2T0P4	Uncharacterized protein.	Heterokaryon incompatibility.	0.680
MPH_00018	MPH_02594	K2SJP3	K2STR1	Uncharacterized protein.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.467
MPH_00018	MPH_03151	K2SJP3	K2RWZ6	Uncharacterized protein.	Ubiquitin.	0.544
MPH_00018	MPH_04893	K2SJP3	K2RYP3	Uncharacterized protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.544
MPH_00018	MPH_05100	K2SJP3	K2R5K4	Uncharacterized protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.652
MPH_00018	MPH_05369	K2SJP3	K2RRV0	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.828
MPH_00018	MPH_06675	K2SJP3	K2S0S9	Uncharacterized protein.	Heterokaryon incompatibility.	0.680
MPH_00018	MPH_06944	K2SJP3	K2R0W2	Uncharacterized protein.	Clathrin adaptor mu subunit; Belongs to the adaptor complexes medium subunit family.	0.646
MPH_00018	MPH_07160	K2SJP3	K2SFY1	Uncharacterized protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.544
MPH_00018	MPH_07634	K2SJP3	K2RQZ5	Uncharacterized protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.649
MPH_00018	MPH_08150	K2SJP3	K2RPG9	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.652
MPH_00018	MPH_09551	K2SJP3	K2S8T2	Uncharacterized protein.	Ubiquitin.	0.509
MPH_00018	MPH_10325	K2SJP3	K2S6M0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.828
MPH_00018	MPH_10821	K2SJP3	K2RPH0	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.828
MPH_00018	MPH_11083	K2SJP3	K2S4H0	Uncharacterized protein.	Ras GTPase.	0.723
MPH_00018	MPH_11796	K2SJP3	K2R9F7	Uncharacterized protein.	Heterokaryon incompatibility.	0.680
MPH_00018	MPH_13560	K2SJP3	K2RH45	Uncharacterized protein.	Uncharacterized protein.	0.680
MPH_00018	MPH_13561	K2SJP3	K2RY78	Uncharacterized protein.	Uncharacterized protein.	0.680
MPH_00200	MPH_00018	K2T0P4	K2SJP3	Heterokaryon incompatibility.	Uncharacterized protein.	0.680
MPH_00200	MPH_11083	K2T0P4	K2S4H0	Heterokaryon incompatibility.	Ras GTPase.	0.425