STRINGSTRING
MPH_06839 MPH_06839 MPH_13151 MPH_13151 TSR3 TSR3 MPH_11234 MPH_11234 MPH_10886 MPH_10886 MPH_10257 MPH_10257 MPH_10277 MPH_10277 MPH_09879 MPH_09879 MPH_08385 MPH_08385 MPH_08201 MPH_08201 YTM1 YTM1 MPH_07276 MPH_07276 MPH_07106 MPH_07106 MPH_06836 MPH_06836 MPH_05688 MPH_05688 MPH_12265 MPH_12265 MPH_11956 MPH_11956 MPH_03134 MPH_03134 MPH_03194 MPH_03194 MPH_03204 MPH_03204 MPH_11171 MPH_11171 MPH_12587 MPH_12587 MPH_02518 MPH_02518 MPH_12405 MPH_12405 MPH_11792 MPH_11792 MPH_07263 MPH_07263 MPH_11992 MPH_11992 MPH_12183 MPH_12183 MPH_09418 MPH_09418 MPH_09413 MPH_09413 MPH_07888 MPH_07888 MPH_00594 MPH_00594 MPH_07848 MPH_07848 MPH_07843 MPH_07843 MPH_12674 MPH_12674 MPH_08198 MPH_08198 MPH_08327 MPH_08327 MPH_00150 MPH_00150 MPH_10322 MPH_10322 MPH_10332 MPH_10332 MPH_08518 MPH_08518 MPH_00435 MPH_00435 MPH_13133 MPH_13133 MPH_09055 MPH_09055 NOP7 NOP7 MPH_11210 MPH_11210 MPH_11160 MPH_11160 MPH_01288 MPH_01288 MPH_11075 MPH_11075 MPH_01399 MPH_01399 MPH_11688 MPH_11688 MPH_12186 MPH_12186 MPH_07997 MPH_07997 MPH_10739 MPH_10739 MPH_04943 MPH_04943 MPH_06038 MPH_06038 MPH_06011 MPH_06011 MPH_10604 MPH_10604 MPH_05904 MPH_05904 MPH_10329 MPH_10329 MPH_05700 MPH_05700 MPH_07052 MPH_07052 MPH_07147 MPH_07147 MPH_09470 MPH_09470 MPH_09037 MPH_09037 MPH_04210 MPH_04210 MPH_06303 MPH_06303 MPH_08796 MPH_08796 MPH_05679 MPH_05679 MPH_05699 MPH_05699 MPH_08152 MPH_08152 MPH_07957 MPH_07957 MPH_07767 MPH_07767 MPH_05054 MPH_05054 MPH_04886 MPH_04886 MPH_13155 MPH_13155 MPH_04644 MPH_04644 MPH_00545 MPH_00545 MPH_00871 MPH_00871 MPH_00765 MPH_00765 MPH_00950 MPH_00950 MPH_00945 MPH_00945 MPH_01478 MPH_01478 SPB1 SPB1 MPH_03766 MPH_03766 MPH_03901 MPH_03901 MPH_04926 MPH_04926 MPH_05068 MPH_05068 MPH_00168 MPH_00168 MPH_06171 MPH_06171 MPH_00527 MPH_00527 MPH_00665 MPH_00665 MPH_00764 MPH_00764 RPS1 RPS1 MPH_07035 MPH_07035 MPH_01822 MPH_01822 MPH_02039 MPH_02039 MPH_02086 MPH_02086 MPH_02284 MPH_02284 MPH_02381 MPH_02381 MPH_02628 MPH_02628 NAT10 NAT10 MPH_00484 MPH_00484 MPH_00863 MPH_00863 MPH_03257 MPH_03257 ERB1 ERB1 MPH_09582 MPH_09582 MPH_09677 MPH_09677 MPH_01565 MPH_01565 MPH_04306 MPH_04306 cnxG cnxG MPH_10668 MPH_10668 MPH_10724 MPH_10724 MPH_02514 MPH_02514 MPH_13023 MPH_13023 MPH_12308 MPH_12308 MPH_03898 MPH_03898 MPH_05895 MPH_05895 MPH_11833 MPH_11833 MPH_05915 MPH_05915 MPH_03326 MPH_03326 MPH_00773 MPH_00773 MPH_05370 MPH_05370 RPS0 RPS0 MPH_06304 MPH_06304 MPH_11232 MPH_11232 MPH_06645 MPH_06645 MPH_08567 MPH_08567 MPH_11097 MPH_11097 MPH_11077 MPH_11077 MPH_07001 MPH_07001 MPH_11762 MPH_11762 MPH_04273 MPH_04273
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MPH_06839Armadillo-like helical. (776 aa)
MPH_13151WD_REPEATS_REGION domain-containing protein. (930 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (468 aa)
MPH_11234Uncharacterized protein. (251 aa)
MPH_10886Nop domain-containing protein. (563 aa)
MPH_10257Armadillo-like helical. (1796 aa)
MPH_10277Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family. (213 aa)
MPH_09879Ribosomal protein L34Ae. (114 aa)
MPH_08385WD_REPEATS_REGION domain-containing protein. (387 aa)
MPH_08201Uncharacterized protein. (198 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (493 aa)
MPH_07276Ribosomal protein S8. (186 aa)
MPH_071065'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1073 aa)
MPH_06836Ribosomal protein L28e. (153 aa)
MPH_0568840S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (202 aa)
MPH_12265Ribosomal biogenesis methyltransferase EMG1/NEP1. (252 aa)
MPH_11956Uncharacterized protein. (280 aa)
MPH_03134Sas10/Utp3/C1D. (661 aa)
MPH_03194Nucleolar Nop52. (245 aa)
MPH_03204Exoribonuclease phosphorolytic domain 1. (181 aa)
MPH_11171SANT domain DNA binding protein. (671 aa)
MPH_12587K-like protein. (262 aa)
MPH_02518Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (150 aa)
MPH_12405Protein kinase domain-containing protein. (186 aa)
MPH_11792Small-subunit processome Utp12. (457 aa)
MPH_07263S1 motif domain-containing protein. (209 aa)
MPH_11992Plectin/S10. (171 aa)
MPH_12183U3 small nucleolar RNA-associated protein 22. (1191 aa)
MPH_09418RIO kinase. (459 aa)
MPH_09413Exoribonuclease phosphorolytic domain 1. (324 aa)
MPH_07888K-like protein. (253 aa)
MPH_00594Nop14-like protein. (843 aa)
MPH_07848WD_REPEATS_REGION domain-containing protein. (887 aa)
MPH_07843WD_REPEATS_REGION domain-containing protein. (396 aa)
MPH_12674Uncharacterized protein. (356 aa)
MPH_08198Nucleolar protein 12. (234 aa)
MPH_08327ECR1_N domain-containing protein. (350 aa)
MPH_00150rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (379 aa)
MPH_10322Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (155 aa)
MPH_10332Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family. (130 aa)
MPH_08518Ribosomal protein S19e. (147 aa)
MPH_00435CCAAT-binding factor. (548 aa)
MPH_13133Uncharacterized protein. (353 aa)
MPH_09055Mg2+ transporter protein CorA-like/Zinc transport protein ZntB. (356 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (667 aa)
MPH_11210Sas10/Utp3/C1D. (285 aa)
MPH_11160WD_REPEATS_REGION domain-containing protein. (548 aa)
MPH_01288Ribosomal protein S23 eukaryotic/archaeal; Belongs to the universal ribosomal protein uS12 family. (145 aa)
MPH_11075Ribosomal protein S4/S9; Belongs to the universal ribosomal protein uS4 family. (191 aa)
MPH_01399Ribosomal protein S17; Belongs to the universal ribosomal protein uS17 family. (161 aa)
MPH_11688Uncharacterized protein. (341 aa)
MPH_12186Ribosomal protein S10. (135 aa)
MPH_07997Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (583 aa)
MPH_10739Ribosomal protein L37ae. (92 aa)
MPH_04943Down-regulated-in-metastasis protein. (2593 aa)
MPH_06038Peptidase C48 SUMO/Sentrin/Ubl1. (937 aa)
MPH_06011Uncharacterized protein. (1803 aa)
MPH_1060440S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (96 aa)
MPH_05904Ribosomal protein S26e. (394 aa)
MPH_10329Fibrillarin. (275 aa)
MPH_0570040S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (147 aa)
MPH_07052Exoribonuclease phosphorolytic domain 1. (199 aa)
MPH_07147Ribosomal protein S17e. (146 aa)
MPH_09470Exonuclease. (329 aa)
MPH_09037RNAse P Rpr2/Rpp21 subunit. (197 aa)
MPH_04210Uncharacterized protein. (297 aa)
MPH_06303Uncharacterized protein. (370 aa)
MPH_08796RNA-binding S4. (421 aa)
MPH_05679Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (265 aa)
MPH_05699Uncharacterized protein. (571 aa)
MPH_08152Nucleotide binding protein PINc. (194 aa)
MPH_07957Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (119 aa)
MPH_07767RNA 3'-terminal phosphate cyclase. (518 aa)
MPH_05054Ribosomal protein S28e. (68 aa)
MPH_0488640S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (200 aa)
MPH_13155Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (265 aa)
MPH_0464440S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (239 aa)
MPH_00545Ribosomal protein S19/S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
MPH_00871Uncharacterized protein. (292 aa)
MPH_00765Nuclear envelope Cut8; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (318 aa)
MPH_0095060S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
MPH_00945Ribosome biogenesis protein BMS1/TSR1. (609 aa)
MPH_01478Ribosomal protein L18e. (189 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (831 aa)
MPH_03766WD_REPEATS_REGION domain-containing protein. (891 aa)
MPH_03901Peptidase C48 SUMO/Sentrin/Ubl1. (1133 aa)
MPH_04926Uncharacterized protein. (627 aa)
MPH_05068Ribosomal protein S4/S9. (188 aa)
MPH_00168Sas10/Utp3/C1D. (421 aa)
MPH_06171Uncharacterized protein. (759 aa)
MPH_00527RNA 3'-terminal phosphate cyclase. (403 aa)
MPH_00665WD_REPEATS_REGION domain-containing protein. (1030 aa)
MPH_00764Helicase. (1023 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (255 aa)
MPH_07035Eukaryotic rRNA processing. (412 aa)
MPH_01822Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
MPH_02039Bystin. (500 aa)
MPH_02086WD_REPEATS_REGION domain-containing protein. (1001 aa)
MPH_02284Anticodon-binding protein. (298 aa)
MPH_02381RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (363 aa)
MPH_02628Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (143 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1064 aa)
MPH_00484Ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (151 aa)
MPH_00863U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (629 aa)
MPH_03257GTP-binding domain HSR1-related protein. (528 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (803 aa)
MPH_09582Small-subunit processome Utp14. (982 aa)
MPH_09677Exoribonuclease phosphorolytic domain 1. (256 aa)
MPH_01565Helicase. (1248 aa)
MPH_04306Small-subunit processome Utp11. (206 aa)
cnxGMolybdopterin synthase sulfur carrier subunit; Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by UBA4. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin. (96 aa)
MPH_10668RNA-processing protein HAT helix. (444 aa)
MPH_1072440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
MPH_02514Uncharacterized protein. (1051 aa)
MPH_13023WD_REPEATS_REGION domain-containing protein. (396 aa)
MPH_12308Pre-mRNA cleavage complex II Clp1. (751 aa)
MPH_0389820S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (470 aa)
MPH_05895Nop domain-containing protein. (521 aa)
MPH_11833Exoribonuclease phosphorolytic domain 1. (292 aa)
MPH_05915HRDC domain-containing protein. (817 aa)
MPH_03326RNAse P Rpr2/Rpp21 subunit. (219 aa)
MPH_00773U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (705 aa)
MPH_05370RNA helicase ATP-dependent DEAD-box conserved site; Belongs to the DEAD box helicase family. (412 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (304 aa)
MPH_06304Las1-like protein. (428 aa)
MPH_11232Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (375 aa)
MPH_06645Ribosomal protein L2. (254 aa)
MPH_08567HR1 repeat rho-binding protein. (1166 aa)
MPH_1109740S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (221 aa)
MPH_1107740S ribosomal protein S27. (82 aa)
MPH_07001Low temperature viability protein. (447 aa)
MPH_11762WD_REPEATS_REGION domain-containing protein. (555 aa)
MPH_04273Helicase. (773 aa)
Your Current Organism:
Macrophomina phaseolina
NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6
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