Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJY73418.1 | AJY74006.1 | VN24_00710 | VN24_04510 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.870 |
| AJY73418.1 | AJY74555.1 | VN24_00710 | VN24_08195 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.840 |
| AJY73418.1 | AJY75515.1 | VN24_00710 | VN24_14265 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.971 |
| AJY73418.1 | AJY75516.1 | VN24_00710 | VN24_14270 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.989 |
| AJY73418.1 | AJY75790.1 | VN24_00710 | VN24_16085 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.638 |
| AJY73418.1 | AJY76871.1 | VN24_00710 | VN24_22805 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.812 |
| AJY73418.1 | AJY77084.1 | VN24_00710 | VN24_24205 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.898 |
| AJY73418.1 | AJY77085.1 | VN24_00710 | VN24_24210 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol oxidase subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.898 |
| AJY73418.1 | AJY77147.1 | VN24_00710 | VN24_24615 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| AJY73418.1 | AJY77148.1 | VN24_00710 | VN24_24620 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.813 |
| AJY73418.1 | AJY77437.1 | VN24_00710 | VN24_02150 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| AJY73418.1 | sdhB | VN24_00710 | VN24_16095 | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.498 |
| AJY74006.1 | AJY73418.1 | VN24_04510 | VN24_00710 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.870 |
| AJY74006.1 | AJY75515.1 | VN24_04510 | VN24_14265 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.954 |
| AJY74006.1 | AJY75516.1 | VN24_04510 | VN24_14270 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.852 |
| AJY74006.1 | AJY75790.1 | VN24_04510 | VN24_16085 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
| AJY74006.1 | AJY76871.1 | VN24_04510 | VN24_22805 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
| AJY74006.1 | AJY77084.1 | VN24_04510 | VN24_24205 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
| AJY74006.1 | AJY77085.1 | VN24_04510 | VN24_24210 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol oxidase subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.852 |
| AJY74006.1 | AJY77147.1 | VN24_04510 | VN24_24615 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.973 |
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