Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCF62289.1 | CCF62290.1 | NOCYR_1493 | NOCYR_1494 | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | 0.678 |
| CCF62289.1 | CCF62292.1 | NOCYR_1493 | NOCYR_1496 | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Putative Mg(2+) and Co(2+) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.639 |
| CCF62289.1 | era | NOCYR_1493 | NOCYR_1498 | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Membrane-associated, 16S rRNA-binding GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.641 |
| CCF62289.1 | rlmN | NOCYR_1493 | NOCYR_3841 | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Putative Fe-S-cluster redox enzyme; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.557 |
| CCF62289.1 | ybeY | NOCYR_1493 | NOCYR_1495 | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.640 |
| CCF62290.1 | CCF62289.1 | NOCYR_1494 | NOCYR_1493 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.678 |
| CCF62290.1 | CCF62292.1 | NOCYR_1494 | NOCYR_1496 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Putative Mg(2+) and Co(2+) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.800 |
| CCF62290.1 | CCF62293.1 | NOCYR_1494 | NOCYR_1497 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Homologs of previously reported genes of unknown function. | 0.831 |
| CCF62290.1 | CCF63216.1 | NOCYR_1494 | NOCYR_2445 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Putative Mg(2+) and Co(2+) transporter protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.472 |
| CCF62290.1 | CCF63217.1 | NOCYR_1494 | NOCYR_2446 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Homologs of previously reported genes of unknown function. | 0.471 |
| CCF62290.1 | CCF63371.1 | NOCYR_1494 | NOCYR_2601 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Homologs of previously reported genes of unknown function. | 0.462 |
| CCF62290.1 | CCF63372.1 | NOCYR_1494 | NOCYR_2602 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Homologs of previously reported genes of unknown function. | 0.534 |
| CCF62290.1 | era | NOCYR_1494 | NOCYR_1498 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Membrane-associated, 16S rRNA-binding GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.876 |
| CCF62290.1 | recO | NOCYR_1494 | NOCYR_1510 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | DNA repair protein recO (Recombination protein O); Involved in DNA repair and RecF pathway recombination. | 0.817 |
| CCF62290.1 | ybeY | NOCYR_1494 | NOCYR_1495 | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.957 |
| CCF62292.1 | CCF62289.1 | NOCYR_1496 | NOCYR_1493 | Putative Mg(2+) and Co(2+) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.639 |
| CCF62292.1 | CCF62290.1 | NOCYR_1496 | NOCYR_1494 | Putative Mg(2+) and Co(2+) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Phosphate starvation-induced protein; Function of strongly homologous gene; factor. | 0.800 |
| CCF62292.1 | CCF62293.1 | NOCYR_1496 | NOCYR_1497 | Putative Mg(2+) and Co(2+) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Homologs of previously reported genes of unknown function. | 0.867 |
| CCF62292.1 | CCF62295.1 | NOCYR_1496 | NOCYR_1499 | Putative Mg(2+) and Co(2+) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Putative serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.480 |
| CCF62292.1 | CCF62296.1 | NOCYR_1496 | NOCYR_1500 | Putative Mg(2+) and Co(2+) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Homologs of previously reported genes of unknown function. | 0.455 |
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