STRINGSTRING
prfB prfB CCF63636.1 CCF63636.1 CCF63632.1 CCF63632.1 uppP uppP CCF63463.1 CCF63463.1 CCF63434.1 CCF63434.1 CCF63394.1 CCF63394.1 CCF63383.1 CCF63383.1 CCF63375.1 CCF63375.1 CCF63366.1 CCF63366.1 CCF63329.1 CCF63329.1 CCF63294.1 CCF63294.1 CCF63263.1 CCF63263.1 CCF63167.1 CCF63167.1 CCF63132.1 CCF63132.1 recD recD recB recB recC recC CCF63124.1 CCF63124.1 CCF63075.1 CCF63075.1 CCF63019.1 CCF63019.1 argR argR rplT rplT CCF62896.1 CCF62896.1 CCF62722.1 CCF62722.1 CCF62696.1 CCF62696.1 CCF62683.1 CCF62683.1 embC1 embC1 sepF sepF ftsZ ftsZ ftsQ ftsQ murC murC murG murG murD murD mraY mraY murF murF murE murE CCF62605.1 CCF62605.1 CCF62538.1 CCF62538.1 CCF62536.1 CCF62536.1 fusA fusA CCF62363.1 CCF62363.1 CCF62245.1 CCF62245.1 rsfS rsfS CCF62086.1 CCF62086.1 dinG dinG CCF61955.1 CCF61955.1 murA murA rfe rfe prfA prfA CCF61909.1 CCF61909.1 CCF61809.1 CCF61809.1 CCF61613.1 CCF61613.1 cpdA cpdA CCF61511.1 CCF61511.1 CCF61451.1 CCF61451.1 CCF61431.1 CCF61431.1 CCF61392.1 CCF61392.1 CCF61342.1 CCF61342.1 CCF61245.1 CCF61245.1 topA topA CCF61179.1 CCF61179.1 CCF61103.1 CCF61103.1 CCF61102.1 CCF61102.1 CCF61083.1 CCF61083.1 CCF60998.1 CCF60998.1 CCF60993.1 CCF60993.1 CCF60979.1 CCF60979.1 CCF60978.1 CCF60978.1 CCF60977.1 CCF60977.1 embC embC embB embB fbpC fbpC CCF60960.1 CCF60960.1 CCF60959.1 CCF60959.1 CCF60958.1 CCF60958.1 CCF60957.1 CCF60957.1 glf glf CCF60917.1 CCF60917.1 CCF60901.1 CCF60901.1 CCF60851.1 CCF60851.1 gyrA gyrA gyrB gyrB narJ narJ CCF63871.1 CCF63871.1 CCF64139.1 CCF64139.1 CCF64183.1 CCF64183.1 CCF64184.1 CCF64184.1 CCF64186.1 CCF64186.1 CCF64187.1 CCF64187.1 CCF64190.1 CCF64190.1 CCF64191.1 CCF64191.1 CCF64193.1 CCF64193.1 priA priA CCF64292.1 CCF64292.1 mltG mltG ruvB ruvB ruvA ruvA CCF64390.1 CCF64390.1 CCF64410.1 CCF64410.1 CCF64429.1 CCF64429.1 CCF64475.1 CCF64475.1 CCF64500.1 CCF64500.1 CCF64530.1 CCF64530.1 CCF64531.1 CCF64531.1 frr frr CCF64619.1 CCF64619.1 CCF64633.1 CCF64633.1 smc smc recG recG ddl ddl hupA hupA iscS iscS CCF64808.1 CCF64808.1 fbpC2 fbpC2 CCF64895.1 CCF64895.1 uvrD uvrD CCF65024.1 CCF65024.1 CCF65025.1 CCF65025.1 narJ3 narJ3 CCF65060.1 CCF65060.1 CCF65061.1 CCF65061.1 CCF65116.1 CCF65116.1 CCF65124.1 CCF65124.1 CCF65169.1 CCF65169.1 deaD deaD CCF65182.1 CCF65182.1 CCF65219.1 CCF65219.1 typA typA CCF65285.1 CCF65285.1 CCF65418.1 CCF65418.1 mazG mazG mfd mfd glmU glmU prfC prfC CCF65464.1 CCF65464.1 pcrA pcrA murI murI CCF65712.1 CCF65712.1 CCF65713.1 CCF65713.1 CCF65714.1 CCF65714.1 murB murB CCF65790.1 CCF65790.1 CCF65797.1 CCF65797.1 CCF65894.1 CCF65894.1 CCF65975.1 CCF65975.1 CCF66060.1 CCF66060.1 CCF66081.1 CCF66081.1 mmpL3 mmpL3 CCF66203.1 CCF66203.1 dnaB dnaB CCF66284.1 CCF66284.1 CCF66313.1 CCF66313.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prfBPeptide chain release factor 2 (RF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (374 aa)
CCF63636.1Protein of unknown function, putative TPR domain; No homology to any previously reported sequences. (1246 aa)
CCF63632.1Protein of unknown function; No homology to any previously reported sequences. (1992 aa)
uppPUndecaprenyl-diphosphatase (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (311 aa)
CCF63463.1Secreted esterase; Function of strongly homologous gene; enzyme. (349 aa)
CCF63434.1Putative conserved transmembrane transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (730 aa)
CCF63394.1Putative invasin, peptidase related; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (488 aa)
CCF63383.1Putative transmembrane transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (734 aa)
CCF63375.1Putative RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (446 aa)
CCF63366.1Homologs of previously reported genes of unknown function. (524 aa)
CCF63329.1Homologs of previously reported genes of unknown function. (222 aa)
CCF63294.1Respiratory nitrate reductase (Delta chain) narJ; Function of strongly homologous gene; enzyme. (221 aa)
CCF63263.1Multidrug efflux transporter; Function of strongly homologous gene; transporter. (735 aa)
CCF63167.1Phenolphthiocerol/phthiocerol/phthiodiolone dimycocerosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (368 aa)
CCF63132.1Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (710 aa)
recDExonuclease V (RecBCD complex), alpha chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination [...] (629 aa)
recBRecB protein; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrade [...] (1107 aa)
recCPutative exonuclease V (RecBCD complex), gamma chain recC; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA [...] (1243 aa)
CCF63124.1Homologs of previously reported genes of unknown function. (298 aa)
CCF63075.1Homologs of previously reported genes of unknown function. (209 aa)
CCF63019.1Homologs of previously reported genes of unknown function. (463 aa)
argRArginine repressor; Regulates arginine biosynthesis genes. (171 aa)
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (126 aa)
CCF62896.1ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. (780 aa)
CCF62722.1Homologs of previously reported genes of unknown function. (137 aa)
CCF62696.1Two-component system sensor kinase; Function of strongly homologous gene; enzyme. (405 aa)
CCF62683.1Homologs of previously reported genes of unknown function. (245 aa)
embC1Function of strongly homologous gene; enzyme. (1091 aa)
sepFCell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. (254 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (413 aa)
ftsQCell division protein; Essential cell division protein. (230 aa)
murCUDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase); Cell wall formation; Belongs to the MurCDEF family. (500 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (391 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (494 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide- transferase (UDP-MurNAc-pentapeptide phosphotransferase); First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (358 aa)
murFUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (504 aa)
murEUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (528 aa)
CCF62605.1Putative FeS cluster assembly protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the HesB/IscA family. (116 aa)
CCF62538.1Putative UvrD/REP helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (618 aa)
CCF62536.1Putative UvrD/REP helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (669 aa)
fusAElongation factor G-like protein; Function of strongly homologous gene; factor. (720 aa)
CCF62363.1Putative Multidrug efflux transporter AcrB transmembrane domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (719 aa)
CCF62245.1Homologs of previously reported genes of unknown function. (288 aa)
rsfSConserved protein of unknown function; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. (134 aa)
CCF62086.1Homologs of previously reported genes of unknown function. (596 aa)
dinGATP-dependent helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (682 aa)
CCF61955.1Homologs of previously reported genes of unknown function. (317 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (419 aa)
rfeUNDECAPAPRENYL-PHOSPHATE ALPHA-N-ACETYLGLUCOSAMINYLTRANSFERASE RFE (UDP-GlcNAc TRANSFERASE); Function of strongly homologous gene; enzyme. (399 aa)
prfAPeptide chain release factor RF-1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (356 aa)
CCF61909.1Putative helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (937 aa)
CCF61809.1Serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family. (415 aa)
CCF61613.1Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (438 aa)
cpdAPutative phosphodiesterase (fragment); Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. (259 aa)
CCF61511.1Putative surface-exposed protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (103 aa)
CCF61451.1Putative DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (552 aa)
CCF61431.1Putative transcriptional regulator (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (640 aa)
CCF61392.1Putative mycolyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (310 aa)
CCF61342.1Homologs of previously reported genes of unknown function. (480 aa)
CCF61245.1Protein of unknown function; No homology to any previously reported sequences. (156 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (940 aa)
CCF61179.1Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (766 aa)
CCF61103.1Putative cobyric acid synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (236 aa)
CCF61102.1Putative UDP-N-acetylmuramoylalanine--D-glutamate ligase, murD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (405 aa)
CCF61083.1Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (757 aa)
CCF60998.1L-rhamnosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (329 aa)
CCF60993.1Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (636 aa)
CCF60979.1Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (492 aa)
CCF60978.1Putative short chain dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (259 aa)
CCF60977.1Homologs of previously reported genes of unknown function. (711 aa)
embCArabinosyltransferase embC; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (1092 aa)
embBArabinosyltransferase; Function of strongly homologous gene; enzyme. (1088 aa)
fbpCDiacylglycerol O-acyltransferase / trehalose O-mycolyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (344 aa)
CCF60960.1Homologs of previously reported genes of unknown function. (650 aa)
CCF60959.1Putative polyprenyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the UbiA prenyltransferase family. (322 aa)
CCF60958.1Putative phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (213 aa)
CCF60957.1Putative galactofuranosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (644 aa)
glfUDP-galactopyranose mutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (409 aa)
CCF60917.1Putative LytR family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (410 aa)
CCF60901.1Homologs of previously reported genes of unknown function. (576 aa)
CCF60851.1Putative PENICILLIN-BINDING PROTEIN PBPA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (488 aa)
gyrADNA gyrase (type II topoisomerase), subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...] (836 aa)
gyrBDNA topoisomerase IV subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (685 aa)
narJNitrate reductase molybdenum cofactor assembly chaperone; Function of strongly homologous gene; enzyme. (229 aa)
CCF63871.1Putative DNA topoisomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (337 aa)
CCF64139.1Putative endonuclease sbcC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1449 aa)
CCF64183.1Protein of unknown function; No homology to any previously reported sequences. (766 aa)
CCF64184.1Homologs of previously reported genes of unknown function. (487 aa)
CCF64186.1Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (123 aa)
CCF64187.1Putative scaffold protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (165 aa)
CCF64190.1Putative component of SufBCD complex; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (392 aa)
CCF64191.1Putative component of SufBCD complex; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (478 aa)
CCF64193.1Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (560 aa)
priAPriA primosome assembly protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (592 aa)
CCF64292.1MMPL domain protein; Function of strongly homologous gene; membrane component. (741 aa)
mltGAminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (504 aa)
ruvBHolliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (358 aa)
ruvAHolliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (201 aa)
CCF64390.1Homologs of previously reported genes of unknown function. (441 aa)
CCF64410.1Conserved protein of unknown function, putative nucleic acid binding domain; Homologs of previously reported genes of unknown function. (75 aa)
CCF64429.1Putative helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (585 aa)
CCF64475.1Homologs of previously reported genes of unknown function. (457 aa)
CCF64500.1N-acetylglutamate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (204 aa)
CCF64530.1Putative arylmalonate decarboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (246 aa)
CCF64531.1Putative arylmalonate decarboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (247 aa)
frrRibosome recycling factor (Ribosome-releasing factor) (RRF); Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (185 aa)
CCF64619.1Putative magnesium chelatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (502 aa)
CCF64633.1Putative RNA binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the UPF0109 family. (80 aa)
smcChromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1225 aa)
recGATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (756 aa)
ddlD-alanine--D-alanine ligase (D-alanylalanine synthetase) (D-Ala-D-Ala ligase); Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (357 aa)
hupAHU, DNA-binding transcriptional regulator, alpha subunit; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (221 aa)
iscSCysteine desulfurase; Function of strongly homologous gene; enzyme. (409 aa)
CCF64808.1Conserved protein of unknown function, putative Pyrrolo-quinoline quinone domain; Homologs of previously reported genes of unknown function. (419 aa)
fbpC2Diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (324 aa)
CCF64895.1Putative D-alanyl-D-alanine carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family. (304 aa)
uvrDATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. (718 aa)
CCF65024.1Putative DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the helicase family. UvrD subfamily. (1117 aa)
CCF65025.1Putative helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the helicase family. UvrD subfamily. (1428 aa)
narJ3Nitrate reductase delta subunit; Function of strongly homologous gene; factor. (226 aa)
CCF65060.1Putative ATP-dependent RNA helicase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. (607 aa)
CCF65061.1Homologs of previously reported genes of unknown function. (408 aa)
CCF65116.1Putative membrane-bound protein lytR, transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (473 aa)
CCF65124.1Homologs of previously reported genes of unknown function. (836 aa)
CCF65169.1Homologs of previously reported genes of unknown function. (197 aa)
deaDATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. (591 aa)
CCF65182.1Conserved protein of unknown function, putative helicase domain; Homologs of previously reported genes of unknown function. (1227 aa)
CCF65219.1Conserved protein of unknown function, putative Mrp domain; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (370 aa)
typAGTP-binding elongation factor; Function of strongly homologous gene; factor. (635 aa)
CCF65285.1Homologs of previously reported genes of unknown function. (142 aa)
CCF65418.1Putative transmembrane transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (732 aa)
mazGNucleoside triphosphate pyrophosphohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (243 aa)
mfdPutative transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1459 aa)
glmUGlucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (496 aa)
prfCPutative peptide chain release factor; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (547 aa)
CCF65464.1Protein of unknown function; No homology to any previously reported sequences. (267 aa)
pcrAATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. (906 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (253 aa)
CCF65712.1Putative cytochrome c assembly membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (325 aa)
CCF65713.1Putative cytochrome c biogenesis membrane protein ResB family protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (558 aa)
CCF65714.1Putative cytochrome c biogenesis membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (282 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase (UDP-N-acetylmuramate dehydrogenase); Cell wall formation. (363 aa)
CCF65790.1Putative Vitamin K epoxide reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (188 aa)
CCF65797.1Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (590 aa)
CCF65894.1Putative membrane protein, MmpL family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (762 aa)
CCF65975.1Homologs of previously reported genes of unknown function. (716 aa)
CCF66060.1Homologs of previously reported genes of unknown function. (201 aa)
CCF66081.1Homologs of previously reported genes of unknown function. (1455 aa)
mmpL3Membrane protein mmpL3; Function of strongly homologous gene; membrane component. (1153 aa)
CCF66203.1Homologs of previously reported genes of unknown function. (374 aa)
dnaBReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (460 aa)
CCF66284.1Homologs of previously reported genes of unknown function. (295 aa)
CCF66313.1Putative RNA-binding protein Jag; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor. (171 aa)
Your Current Organism:
Nocardia cyriacigeorgica
NCBI taxonomy Id: 1127134
Other names: N. cyriacigeorgica GUH-2, Nocardia cyriacigeorgica GUH-2, Nocardia cyriacigeorgica str. GUH-2, Nocardia cyriacigeorgica strain GUH-2
Server load: low (24%) [HD]