STRINGSTRING
CCF63282.1 CCF63282.1 CCF60933.1 CCF60933.1 CCF61320.1 CCF61320.1 nirD nirD qcrA qcrA CCF63037.1 CCF63037.1 ksh ksh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCF63282.1Putative oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (383 aa)
CCF60933.1Putative Iron-sulfur cluster-binding protein, RIESKE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (512 aa)
CCF61320.1Putative hydroxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (405 aa)
nirDNitrite reductase (NAD(P)H) subunit; Function of strongly homologous gene; enzyme. (133 aa)
qcrAFe-S protein of cytochrome c reductase complex; Function of strongly homologous gene; carrier. (393 aa)
CCF63037.1Putative iron-sulfur binding oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (506 aa)
kshKetosteroid-9-alpha-hydroxylase, oxygenase; Function of strongly homologous gene; enzyme. (389 aa)
Your Current Organism:
Nocardia cyriacigeorgica
NCBI taxonomy Id: 1127134
Other names: N. cyriacigeorgica GUH-2, Nocardia cyriacigeorgica GUH-2, Nocardia cyriacigeorgica str. GUH-2, Nocardia cyriacigeorgica strain GUH-2
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