STRINGSTRING
vapC-2 vapC-2 vapC vapC vapC-3 vapC-3 vapC-4 vapC-4 CCF62452.1 CCF62452.1 polA polA CCF64091.1 CCF64091.1 vapC-5 vapC-5 CCF65322.1 CCF65322.1 vapC-6 vapC-6 vapC-7 vapC-7 CCF66100.1 CCF66100.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vapC-2Conserved protein of unknown function; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (132 aa)
vapCConserved hypothetical protein of unknown function; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (139 aa)
vapC-3Conserved protein of unknown function; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (139 aa)
vapC-4Protein of unknown function; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)
CCF62452.1Homologs of previously reported genes of unknown function. (130 aa)
polAFragment of putative branched-chain amino acid transporter ATP-binding protein (part 2); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (887 aa)
CCF64091.15'-3' exonuclease; Function of strongly homologous gene; enzyme. (323 aa)
vapC-5Conserved protein of unknown function, putative PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (136 aa)
CCF65322.1Putative PhoH-like phosphate starvation-induced protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (449 aa)
vapC-6Plasmid stability protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (139 aa)
vapC-7Conserved protein of unknown function; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (140 aa)
CCF66100.1PilT protein-like (fragment); Function of strongly homologous gene; putative cell process. (121 aa)
Your Current Organism:
Nocardia cyriacigeorgica
NCBI taxonomy Id: 1127134
Other names: N. cyriacigeorgica GUH-2, Nocardia cyriacigeorgica GUH-2, Nocardia cyriacigeorgica str. GUH-2, Nocardia cyriacigeorgica strain GUH-2
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