STRINGSTRING
spoT spoT AFS79728.1 AFS79728.1 AFS79594.1 AFS79594.1 AFS79554.1 AFS79554.1 AFS79431.1 AFS79431.1 AFS78981.1 AFS78981.1 AFS78906.1 AFS78906.1 AFS78823.1 AFS78823.1 AFS78806.1 AFS78806.1 rny rny cca cca AFS77759.1 AFS77759.1 AFS77637.1 AFS77637.1 AFS77486.1 AFS77486.1 yhaM yhaM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
spoTGTP pyrophosphokinase/(p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (721 aa)
AFS79728.1HD domain-containingmetal dependent phosphohydrolase. (356 aa)
AFS79594.1Putative metal dependent phosphohydrolase. (228 aa)
AFS79554.1Metal dependent phosphohydrolase with DH domain. (360 aa)
AFS79431.1Putative metal dependent phosphohydrolase. (355 aa)
AFS78981.1Metal dependent phosphohydrolase. (187 aa)
AFS78906.1Metal dependent phosphohydrolase with HDIG domain. (187 aa)
AFS78823.1Metal dependent phosphohydrolase. (698 aa)
AFS78806.1Putative metaldependent phosphohydrolase. (195 aa)
rnyPutative 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Endoribonuclease that initiates mRNA decay. (402 aa)
ccaCCA-adding enzyme Cca. (449 aa)
AFS77759.1HD domain-containing metal dependent phosphohydrolase. (355 aa)
AFS77637.1Metal dependent phosphohydrolase. (607 aa)
AFS77486.1Metal dependent phosphohydrolase. (200 aa)
yhaM3'-5' exoribonuclease YhaM. (323 aa)
Your Current Organism:
Gottschalkia acidurici
NCBI taxonomy Id: 1128398
Other names: Clostridium acidurici 9a, G. acidurici 9a, Gottschalkia acidurici 9a
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