STRINGSTRING
AFU00004.1 AFU00004.1 AFU00845.1 AFU00845.1 AFU01635.1 AFU01635.1 AFU01636.1 AFU01636.1 AFU01640.1 AFU01640.1 AFU01641.1 AFU01641.1 AFU01642.1 AFU01642.1 AFU01643.1 AFU01643.1 AFU01644.1 AFU01644.1 AFU01645.1 AFU01645.1 AFU01984.1 AFU01984.1 AFU02459.1 AFU02459.1 AFU03781.1 AFU03781.1 AFU05567.1 AFU05567.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFU00004.1COG2303 Choline dehydrogenase and related flavoproteins. (519 aa)
AFU00845.1COG1012 NAD-dependent aldehyde dehydrogenases. (501 aa)
AFU01635.1NAD/mycothiol-dependent formaldehyde dehydrogenase (MD-FALDH); COG1062 Zn-dependent alcohol dehydrogenases, class III. (361 aa)
AFU01636.1ferredoxin--NAD(+) reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (387 aa)
AFU01640.1Dioxyenase; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit. (383 aa)
AFU01641.1COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (493 aa)
AFU01642.1COG0531 Amino acid transporters. (509 aa)
AFU01643.1COG2303 Choline dehydrogenase and related flavoproteins. (518 aa)
AFU01644.1COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains. (613 aa)
AFU01645.1Regulatory proteins IclR; COG1414 Transcriptional regulator. (261 aa)
AFU01984.1Oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins. (518 aa)
AFU02459.1COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (476 aa)
AFU03781.1COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (488 aa)
AFU05567.1COG2303 Choline dehydrogenase and related flavoproteins. (487 aa)
Your Current Organism:
Nocardia brasiliensis
NCBI taxonomy Id: 1133849
Other names: N. brasiliensis ATCC 700358, Nocardia brasiliensis ATCC 700358, Nocardia brasiliensis HUJEG-1, Nocardia brasiliensis str. ATCC 700358, Nocardia brasiliensis strain ATCC 700358
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