(5 nodes) Next to BRCA1, central domain, and Ubiquitin-like autophagy protein Apg12 network (Scleropages formosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sqstm1	Sequestosome-1-like. (441 aa)
	nbr1	Next to BRCA1 protein 1-like. (918 aa)
	Z043_108292	PB1 domain-containing protein. (851 aa)
	Gabarap	GABA(A) receptor associated protein-like. (255 aa)
	gabarapl2	Gamma-aminobutyric acid receptor-associated protein-like 2-like. (128 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gabarap	Z043_108292	ENSSFOP00015035742	ENSSFOP00015031354	GABA(A) receptor associated protein-like.	PB1 domain-containing protein.	0.999
Gabarap	gabarapl2	ENSSFOP00015035742	ENSSFOP00015045519	GABA(A) receptor associated protein-like.	Gamma-aminobutyric acid receptor-associated protein-like 2-like.	0.908
Gabarap	nbr1	ENSSFOP00015035742	ENSSFOP00015013624	GABA(A) receptor associated protein-like.	Next to BRCA1 protein 1-like.	0.999
Gabarap	sqstm1	ENSSFOP00015035742	ENSSFOP00015004346	GABA(A) receptor associated protein-like.	Sequestosome-1-like.	0.984
Z043_108292	Gabarap	ENSSFOP00015031354	ENSSFOP00015035742	PB1 domain-containing protein.	GABA(A) receptor associated protein-like.	0.999
Z043_108292	gabarapl2	ENSSFOP00015031354	ENSSFOP00015045519	PB1 domain-containing protein.	Gamma-aminobutyric acid receptor-associated protein-like 2-like.	0.999
Z043_108292	nbr1	ENSSFOP00015031354	ENSSFOP00015013624	PB1 domain-containing protein.	Next to BRCA1 protein 1-like.	0.998
Z043_108292	sqstm1	ENSSFOP00015031354	ENSSFOP00015004346	PB1 domain-containing protein.	Sequestosome-1-like.	0.942
gabarapl2	Gabarap	ENSSFOP00015045519	ENSSFOP00015035742	Gamma-aminobutyric acid receptor-associated protein-like 2-like.	GABA(A) receptor associated protein-like.	0.908
gabarapl2	Z043_108292	ENSSFOP00015045519	ENSSFOP00015031354	Gamma-aminobutyric acid receptor-associated protein-like 2-like.	PB1 domain-containing protein.	0.999
gabarapl2	nbr1	ENSSFOP00015045519	ENSSFOP00015013624	Gamma-aminobutyric acid receptor-associated protein-like 2-like.	Next to BRCA1 protein 1-like.	0.999
gabarapl2	sqstm1	ENSSFOP00015045519	ENSSFOP00015004346	Gamma-aminobutyric acid receptor-associated protein-like 2-like.	Sequestosome-1-like.	0.984
nbr1	Gabarap	ENSSFOP00015013624	ENSSFOP00015035742	Next to BRCA1 protein 1-like.	GABA(A) receptor associated protein-like.	0.999
nbr1	Z043_108292	ENSSFOP00015013624	ENSSFOP00015031354	Next to BRCA1 protein 1-like.	PB1 domain-containing protein.	0.998
nbr1	gabarapl2	ENSSFOP00015013624	ENSSFOP00015045519	Next to BRCA1 protein 1-like.	Gamma-aminobutyric acid receptor-associated protein-like 2-like.	0.999
nbr1	sqstm1	ENSSFOP00015013624	ENSSFOP00015004346	Next to BRCA1 protein 1-like.	Sequestosome-1-like.	0.942
sqstm1	Gabarap	ENSSFOP00015004346	ENSSFOP00015035742	Sequestosome-1-like.	GABA(A) receptor associated protein-like.	0.984
sqstm1	Z043_108292	ENSSFOP00015004346	ENSSFOP00015031354	Sequestosome-1-like.	PB1 domain-containing protein.	0.942
sqstm1	gabarapl2	ENSSFOP00015004346	ENSSFOP00015045519	Sequestosome-1-like.	Gamma-aminobutyric acid receptor-associated protein-like 2-like.	0.984
sqstm1	nbr1	ENSSFOP00015004346	ENSSFOP00015013624	Sequestosome-1-like.	Next to BRCA1 protein 1-like.	0.942