(13 nodes) Mixed, incl. Granulin, and Mitochondrial citrate transmembrane transport network (Scleropages formosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	leng1	Leukocyte receptor cluster member 1-like. (277 aa)
	LOC108927044	Cystatin-like; Belongs to the cystatin family. (140 aa)
	c14hxorf56	UPF0428 protein CXorf56-like. (224 aa)
	LOC108922031	Granulins-like. (271 aa)
	SLC25A1	Solute carrier family 25 (mitochondrial citrate transporter), member 1. (279 aa)
	Z043_100454	Uncharacterized protein. (848 aa)
	ENSSFOP00015033197	Neurogenic locus notch homolog protein 2-like isoform X1. (762 aa)
	LOC108939430	Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily. (391 aa)
	grn	Granulins-like. (807 aa)
	LOC108921264	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family. (365 aa)
	LOC108928050	Uncharacterized protein. (708 aa)
	c7h15orf40	UPF0235 protein C15orf40-like. (191 aa)
	Z043_112559	Mitochondrial tricarboxylate transport protein-like; Belongs to the mitochondrial carrier (TC 2.A.29) family. (329 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFOP00015033197	LOC108921264	ENSSFOP00015033197	ENSSFOP00015046455	Neurogenic locus notch homolog protein 2-like isoform X1.	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.485
ENSSFOP00015033197	LOC108939430	ENSSFOP00015033197	ENSSFOP00015033331	Neurogenic locus notch homolog protein 2-like isoform X1.	Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily.	0.428
ENSSFOP00015033197	SLC25A1	ENSSFOP00015033197	ENSSFOP00015025609	Neurogenic locus notch homolog protein 2-like isoform X1.	Solute carrier family 25 (mitochondrial citrate transporter), member 1.	0.485
ENSSFOP00015033197	Z043_112559	ENSSFOP00015033197	ENSSFOP00015069280	Neurogenic locus notch homolog protein 2-like isoform X1.	Mitochondrial tricarboxylate transport protein-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.485
ENSSFOP00015033197	c14hxorf56	ENSSFOP00015033197	ENSSFOP00015012849	Neurogenic locus notch homolog protein 2-like isoform X1.	UPF0428 protein CXorf56-like.	0.593
ENSSFOP00015033197	c7h15orf40	ENSSFOP00015033197	ENSSFOP00015052969	Neurogenic locus notch homolog protein 2-like isoform X1.	UPF0235 protein C15orf40-like.	0.593
LOC108921264	ENSSFOP00015033197	ENSSFOP00015046455	ENSSFOP00015033197	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Neurogenic locus notch homolog protein 2-like isoform X1.	0.485
LOC108921264	LOC108922031	ENSSFOP00015046455	ENSSFOP00015018271	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Granulins-like.	0.485
LOC108921264	LOC108939430	ENSSFOP00015046455	ENSSFOP00015033331	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily.	0.453
LOC108921264	Z043_100454	ENSSFOP00015046455	ENSSFOP00015033165	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.485
LOC108921264	c14hxorf56	ENSSFOP00015046455	ENSSFOP00015012849	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	UPF0428 protein CXorf56-like.	0.618
LOC108921264	c7h15orf40	ENSSFOP00015046455	ENSSFOP00015052969	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	UPF0235 protein C15orf40-like.	0.618
LOC108921264	grn	ENSSFOP00015046455	ENSSFOP00015043296	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Granulins-like.	0.485
LOC108921264	leng1	ENSSFOP00015046455	ENSSFOP00015000445	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Leukocyte receptor cluster member 1-like.	0.433
LOC108922031	LOC108921264	ENSSFOP00015018271	ENSSFOP00015046455	Granulins-like.	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.485
LOC108922031	LOC108939430	ENSSFOP00015018271	ENSSFOP00015033331	Granulins-like.	Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily.	0.428
LOC108922031	SLC25A1	ENSSFOP00015018271	ENSSFOP00015025609	Granulins-like.	Solute carrier family 25 (mitochondrial citrate transporter), member 1.	0.485
LOC108922031	Z043_112559	ENSSFOP00015018271	ENSSFOP00015069280	Granulins-like.	Mitochondrial tricarboxylate transport protein-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.485
LOC108922031	c14hxorf56	ENSSFOP00015018271	ENSSFOP00015012849	Granulins-like.	UPF0428 protein CXorf56-like.	0.593
LOC108922031	c7h15orf40	ENSSFOP00015018271	ENSSFOP00015052969	Granulins-like.	UPF0235 protein C15orf40-like.	0.593