(28 nodes) Mixed, incl. Chloride channel, core, and Metal ion:proton antiporter activity network (Scleropages formosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC24A3	Sodium/potassium/calcium exchanger 3-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (669 aa)
	Z043_102839	Uncharacterized protein. (1624 aa)
	LOC108926295	H(+)/Cl(-) exchange transporter 7-like. (791 aa)
	Slc9a6	Solute carrier family 9 (sodium/hydrogen exchanger), member 6/7. (702 aa)
	LOC108931956	LETM1 domain-containing protein LETM2, mitochondrial-like. (474 aa)
	ostm1	Osteopetrosis-associated transmembrane protein 1-like. (300 aa)
	Z043_109983	Tyrosine-protein phosphatase non-receptor type 14-like. (401 aa)
	ENSSFOP00015027785	annotation not available (307 aa)
	clcn5	Chloride channel protein. (826 aa)
	ENSSFOP00015030771	Zgc:85936. (927 aa)
	WWC2	Protein WWC2-like. (1159 aa)
	slc9a8	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (645 aa)
	Z043_102028	Chloride channel protein. (807 aa)
	wwc1	Protein KIBRA-like. (1118 aa)
	SLC9A9	Na_H_Exchanger domain-containing protein. (628 aa)
	LOC108922954	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (694 aa)
	ENSSFOP00015052133	annotation not available (324 aa)
	slc9a7	Na_H_Exchanger domain-containing protein. (708 aa)
	ENSSFOP00015062101	annotation not available (233 aa)
	slc8b1	Sodium/potassium/calcium exchanger 6, mitochondrial-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (579 aa)
	Fam131b	Protein FAM131B isoform X1. (423 aa)
	clcn6	Chloride channel protein. (870 aa)
	Slc26a3	Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (737 aa)
	clcn3	Chloride channel protein. (867 aa)
	tmco3	Transmembrane and coiled-coil domain-containing protein 3-like. (673 aa)
	ptpn14	Tyrosine-protein phosphatase non-receptor type 14-like. (1220 aa)
	Clcn7	Chloride channel protein. (814 aa)
	slc12a4	Uncharacterized protein. (1098 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Clcn7	ostm1	ENSSFOP00015078430	ENSSFOP00015023118	Chloride channel protein.	Osteopetrosis-associated transmembrane protein 1-like.	0.918
Clcn7	slc9a8	ENSSFOP00015078430	ENSSFOP00015034460	Chloride channel protein.	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	0.411
ENSSFOP00015027785	ENSSFOP00015052133	ENSSFOP00015027785	ENSSFOP00015052133	annotation not available	annotation not available	0.900
ENSSFOP00015027785	Z043_109983	ENSSFOP00015027785	ENSSFOP00015027758	annotation not available	Tyrosine-protein phosphatase non-receptor type 14-like.	0.887
ENSSFOP00015030771	slc9a8	ENSSFOP00015030771	ENSSFOP00015034460	Zgc:85936.	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	0.458
ENSSFOP00015052133	ENSSFOP00015027785	ENSSFOP00015052133	ENSSFOP00015027785	annotation not available	annotation not available	0.900
ENSSFOP00015052133	Z043_109983	ENSSFOP00015052133	ENSSFOP00015027758	annotation not available	Tyrosine-protein phosphatase non-receptor type 14-like.	0.891
ENSSFOP00015062101	tmco3	ENSSFOP00015062101	ENSSFOP00015076941	annotation not available	Transmembrane and coiled-coil domain-containing protein 3-like.	0.706
Fam131b	Z043_102839	ENSSFOP00015065112	ENSSFOP00015011959	Protein FAM131B isoform X1.	Uncharacterized protein.	0.505
LOC108922954	slc8b1	ENSSFOP00015048953	ENSSFOP00015063835	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	Sodium/potassium/calcium exchanger 6, mitochondrial-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.488
LOC108922954	tmco3	ENSSFOP00015048953	ENSSFOP00015076941	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	Transmembrane and coiled-coil domain-containing protein 3-like.	0.452
LOC108926295	ostm1	ENSSFOP00015014991	ENSSFOP00015023118	H(+)/Cl(-) exchange transporter 7-like.	Osteopetrosis-associated transmembrane protein 1-like.	0.918
LOC108926295	slc9a8	ENSSFOP00015014991	ENSSFOP00015034460	H(+)/Cl(-) exchange transporter 7-like.	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	0.411
SLC9A9	slc8b1	ENSSFOP00015048130	ENSSFOP00015063835	Na_H_Exchanger domain-containing protein.	Sodium/potassium/calcium exchanger 6, mitochondrial-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.488
SLC9A9	tmco3	ENSSFOP00015048130	ENSSFOP00015076941	Na_H_Exchanger domain-containing protein.	Transmembrane and coiled-coil domain-containing protein 3-like.	0.452
Slc9a6	slc8b1	ENSSFOP00015019019	ENSSFOP00015063835	Solute carrier family 9 (sodium/hydrogen exchanger), member 6/7.	Sodium/potassium/calcium exchanger 6, mitochondrial-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.488
Slc9a6	slc9a7	ENSSFOP00015019019	ENSSFOP00015060274	Solute carrier family 9 (sodium/hydrogen exchanger), member 6/7.	Na_H_Exchanger domain-containing protein.	0.901
Slc9a6	tmco3	ENSSFOP00015019019	ENSSFOP00015076941	Solute carrier family 9 (sodium/hydrogen exchanger), member 6/7.	Transmembrane and coiled-coil domain-containing protein 3-like.	0.452
WWC2	ostm1	ENSSFOP00015031678	ENSSFOP00015023118	Protein WWC2-like.	Osteopetrosis-associated transmembrane protein 1-like.	0.719
Z043_102028	ostm1	ENSSFOP00015041427	ENSSFOP00015023118	Chloride channel protein.	Osteopetrosis-associated transmembrane protein 1-like.	0.719