STRINGSTRING
tceanc tceanc Z043_107137 Z043_107137 LOC108934430 LOC108934430 polr2g polr2g mllt3 mllt3 gtf3c2 gtf3c2 polr1e polr1e polr2k polr2k CCNK CCNK ell ell ENSSFOP00015005678 ENSSFOP00015005678 cd3eap cd3eap Supt6h Supt6h supt5h supt5h GTF3C1 GTF3C1 polr3b polr3b rtf1 rtf1 ENSSFOP00015014159 ENSSFOP00015014159 LOC108938981 LOC108938981 polr3d polr3d cinp cinp polr1d polr1d polr3h polr3h MARVELD2 MARVELD2 hdgfl2 hdgfl2 nelfcd nelfcd cdc73 cdc73 leo1 leo1 twistnb twistnb GTF3C4 GTF3C4 eaf1 eaf1 Nelfb Nelfb crcp crcp polr2h polr2h Z043_112234 Z043_112234 polr3a polr3a cdk9 cdk9 polr3k polr3k Z043_117980 Z043_117980 znrd1 znrd1 LOC108921333 LOC108921333 HDGFL3 HDGFL3 Polr3g Polr3g nelfe nelfe paf1 paf1 aff4 aff4 rnmt rnmt polr1a polr1a ell3 ell3 polr1c polr1c ENSSFOP00015031043 ENSSFOP00015031043 CCNT2 CCNT2 ENSSFOP00015032353 ENSSFOP00015032353 ICE2 ICE2 Tceanc2 Tceanc2 LOC108936227 LOC108936227 Polr3c Polr3c Z043_110344 Z043_110344 LOC108935875 LOC108935875 Polr3e Polr3e eloa eloa polr2i polr2i LOC108930646 LOC108930646 gtf3c3 gtf3c3 tcea1 tcea1 polr2a polr2a polr2d polr2d Polr2b Polr2b LOC108939517 LOC108939517 LOC108925657 LOC108925657 rrn3 rrn3 LOC108939465 LOC108939465 nelfa nelfa Z043_115316 Z043_115316 CDK13 CDK13 Ccdc17 Ccdc17 srbd1 srbd1 polr2f polr2f supt4h1 supt4h1 Znf512 Znf512 LOC108939045 LOC108939045 tbp tbp HDGF HDGF polr3gl polr3gl CDK13-2 CDK13-2 polr3f polr3f eepd1 eepd1 LOC108939943 LOC108939943 LOC108927357 LOC108927357 dusp11 dusp11 LOC108921416 LOC108921416 brf1 brf1 polr2c polr2c polr1b polr1b LOC108937855 LOC108937855 brf2 brf2 Z043_111364 Z043_111364 eaf2 eaf2 polr2j polr2j rngtt rngtt elof1 elof1 ZNF512B ZNF512B sidt2 sidt2 polr2l polr2l CCNT2-2 CCNT2-2 ctr9 ctr9 TNRC6C TNRC6C Z043_113935 Z043_113935 Z043_109588 Z043_109588 LOC108919817 LOC108919817 LOC108941599 LOC108941599 LOC108936422 LOC108936422 ctdp1 ctdp1 polr2e polr2e
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
tceancTranscription elongation factor A N-terminal and central domain-containing protein-like. (638 aa)
Z043_107137FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (784 aa)
LOC108934430AF4/FMR2 family member 4-like. (1149 aa)
polr2gDNA-directed RNA polymerase II subunit RPB7-like. (180 aa)
mllt3Uncharacterized protein. (601 aa)
gtf3c2General transcription factor 3C polypeptide 2-like. (932 aa)
polr1eDNA-directed RNA polymerase I subunit RPA49-like. (416 aa)
polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4-like. (58 aa)
CCNKCyclin-K-like; Belongs to the cyclin family. (555 aa)
ellUncharacterized protein. (632 aa)
ENSSFOP00015005678annotation not available (88 aa)
cd3eapDNA-directed RNA polymerase I subunit RPA34. (272 aa)
Supt6hTranscription elongation factor SPT6-like. (1664 aa)
supt5hTranscription elongation factor SPT5-like. (1084 aa)
GTF3C1General transcription factor 3C polypeptide 1-like. (1933 aa)
polr3bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
rtf1RNA polymerase-associated protein RTF1-like. (679 aa)
ENSSFOP00015014159annotation not available (1019 aa)
LOC108938981MARVEL domain-containing protein 2-like. (569 aa)
polr3dDNA-directed RNA polymerase III subunit RPC4-like. (404 aa)
cinpCyclin-dependent kinase 2-interacting protein. (222 aa)
polr1dDNA-directed RNA polymerases I and III subunit RPAC2-like. (114 aa)
polr3hDNA-directed RNA polymerase III subunit RPC8-like. (208 aa)
MARVELD2MARVEL domain-containing protein 2-like. (557 aa)
hdgfl2LEDGF domain-containing protein. (664 aa)
nelfcdNegative elongation factor D-like. (605 aa)
cdc73CDC73_C domain-containing protein. (537 aa)
leo1RNA polymerase-associated protein LEO1-like. (674 aa)
twistnbUncharacterized protein. (361 aa)
GTF3C4General transcription factor 3C polypeptide 4-like. (765 aa)
eaf1ELL-associated factor 1-like. (256 aa)
NelfbUncharacterized protein. (591 aa)
crcpRPOL4c domain-containing protein. (149 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Z043_112234Trinucleotide repeat-containing protein 6A-like. (1517 aa)
polr3aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1390 aa)
cdk9Cyclin-dependent kinase 9-like; Belongs to the protein kinase superfamily. (393 aa)
polr3kDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
Z043_117980Uncharacterized protein. (395 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (118 aa)
LOC108921333Protein ENL-like. (596 aa)
HDGFL3Hepatoma-derived growth factor-related protein 3. (209 aa)
Polr3gDNA-directed RNA polymerase III subunit RPC7 isoform X1. (110 aa)
nelfeRRM domain-containing protein. (369 aa)
paf1RNA polymerase II-associated factor 1-like. (534 aa)
aff4Uncharacterized protein. (1167 aa)
rnmtmRNA cap guanine-N7 methyltransferase-like. (395 aa)
polr1aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1702 aa)
ell3RNA polymerase II elongation factor ELL2-like. (601 aa)
polr1cDNA-directed RNA polymerases I and III subunit RPAC1-like. (361 aa)
ENSSFOP00015031043LOW QUALITY PROTEIN: transcription factor TFIIIB component B'' homolog. (491 aa)
CCNT2Cyclin-T2-like; Belongs to the cyclin family. (697 aa)
ENSSFOP00015032353Cyclin T1. (239 aa)
ICE2NMDA receptor-regulated protein 2-like. (945 aa)
Tceanc2Transcription elongation factor A N-terminal and central domain-containing protein 2-like. (282 aa)
LOC108936227AF4/FMR2 family member 1-like. (1133 aa)
Polr3cRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (531 aa)
Z043_110344Zinc finger protein 512B-like. (690 aa)
LOC108935875Transcription elongation factor A protein 3-like isoform X1. (525 aa)
Polr3eDNA-directed RNA polymerase III subunit RPC5-like. (687 aa)
eloaTranscription elongation factor B polypeptide 3-like. (673 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC108930646FACT complex subunit SPT16-like. (1163 aa)
gtf3c3General transcription factor 3C polypeptide 3-like. (892 aa)
tcea1Uncharacterized protein. (318 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1968 aa)
polr2dDNA-directed RNA polymerase II subunit RPB4-like. (144 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
LOC108939517DNA-directed RNA polymerase III subunit RPC4-like. (394 aa)
LOC108925657Transcription elongation factor A protein 2-like. (322 aa)
rrn3RNA polymerase I-specific transcription initiation factor RRN3-like. (631 aa)
LOC108939465Transcription factor IIIA-like. (363 aa)
nelfaHDAg domain-containing protein. (547 aa)
Z043_115316MARVEL domain-containing protein 2-like. (695 aa)
CDK13Cyclin-dependent kinase 13-like. (1280 aa)
Ccdc17Coiled-coil domain-containing protein 17. (465 aa)
srbd1Uncharacterized protein. (993 aa)
polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2-like. (127 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
Znf512Zinc finger protein 512-like. (429 aa)
LOC108939045Repressor of RNA polymerase III transcription MAF1-like. (253 aa)
tbpTATA-box-binding protein-like. (316 aa)
HDGFUncharacterized protein. (235 aa)
polr3glDNA-directed RNA polymerase III subunit RPC7-like. (234 aa)
CDK13-2Protein kinase domain-containing protein. (1411 aa)
polr3fDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (312 aa)
eepd1Endonuclease/exonuclease/phosphatase family domain-containing protein 1-like. (549 aa)
LOC108939943Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (90 aa)
LOC108927357Uncharacterized protein. (571 aa)
dusp11RNA/RNP complex-1-interacting phosphatase-like. (326 aa)
LOC108921416RNA polymerase II elongation factor ELL-like. (562 aa)
brf1TFIIB-type domain-containing protein. (678 aa)
polr2cDNA-directed RNA polymerase II subunit RPB3-like. (275 aa)
polr1bUncharacterized protein; Belongs to the RNA polymerase beta chain family. (1218 aa)
LOC108937855FACT complex subunit SPT16-like. (1058 aa)
brf2Transcription factor IIIB 50 kDa subunit-like. (514 aa)
Z043_111364Trinucleotide repeat-containing protein 6C-like. (1655 aa)
eaf2ELL-associated factor 2-like. (263 aa)
polr2jDNA-directed RNA polymerase II subunit RPB11-a. (130 aa)
rngttmRNA-capping enzyme-like. (612 aa)
elof1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (92 aa)
ZNF512BUncharacterized protein. (708 aa)
sidt2SID1 transmembrane family member 2-like. (869 aa)
polr2lUncharacterized protein. (67 aa)
CCNT2-2Cyclin-T2-like. (643 aa)
ctr9RNA polymerase-associated protein CTR9-like. (1159 aa)
TNRC6CTrinucleotide repeat-containing protein 6C-like. (1807 aa)
Z043_113935Cyclin-T1-like; Belongs to the cyclin family. (499 aa)
Z043_109588Tau95_N domain-containing protein. (541 aa)
LOC108919817Protein ENL-like. (617 aa)
LOC108941599Cyclin-dependent kinase 12-like. (1473 aa)
LOC108936422Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (250 aa)
ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (987 aa)
polr2eDNA-directed RNA polymerases i II and III subunit rpabc1-like. (233 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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