(5 nodes) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity, and beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity network (Scleropages formosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ST3GAL1-2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family. (323 aa)
	c1galt1c1	Uncharacterized protein. (318 aa)
	c1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like. (354 aa)
	Z043_121836	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like. (407 aa)
	Z043_115783	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like. (447 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ST3GAL1-2	Z043_115783	ENSSFOP00015008513	ENSSFOP00015025221	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like.	0.919
ST3GAL1-2	Z043_121836	ENSSFOP00015008513	ENSSFOP00015024615	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like.	0.909
ST3GAL1-2	c1galt1	ENSSFOP00015008513	ENSSFOP00015023398	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.	0.919
ST3GAL1-2	c1galt1c1	ENSSFOP00015008513	ENSSFOP00015008860	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.918
Z043_115783	ST3GAL1-2	ENSSFOP00015025221	ENSSFOP00015008513	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like.	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.	0.919
Z043_115783	c1galt1	ENSSFOP00015025221	ENSSFOP00015023398	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.	0.919
Z043_115783	c1galt1c1	ENSSFOP00015025221	ENSSFOP00015008860	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like.	Uncharacterized protein.	0.915
Z043_121836	ST3GAL1-2	ENSSFOP00015024615	ENSSFOP00015008513	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like.	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.	0.909
Z043_121836	c1galt1	ENSSFOP00015024615	ENSSFOP00015023398	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.	0.920
Z043_121836	c1galt1c1	ENSSFOP00015024615	ENSSFOP00015008860	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like.	Uncharacterized protein.	0.918
c1galt1	ST3GAL1-2	ENSSFOP00015023398	ENSSFOP00015008513	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.	0.919
c1galt1	Z043_115783	ENSSFOP00015023398	ENSSFOP00015025221	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like.	0.919
c1galt1	Z043_121836	ENSSFOP00015023398	ENSSFOP00015024615	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like.	0.920
c1galt1	c1galt1c1	ENSSFOP00015023398	ENSSFOP00015008860	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.	Uncharacterized protein.	0.644
c1galt1c1	ST3GAL1-2	ENSSFOP00015008860	ENSSFOP00015008513	Uncharacterized protein.	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.	0.918
c1galt1c1	Z043_115783	ENSSFOP00015008860	ENSSFOP00015025221	Uncharacterized protein.	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like.	0.915
c1galt1c1	Z043_121836	ENSSFOP00015008860	ENSSFOP00015024615	Uncharacterized protein.	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like.	0.918
c1galt1c1	c1galt1	ENSSFOP00015008860	ENSSFOP00015023398	Uncharacterized protein.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.	0.644