(32 nodes) Mixed, incl. Transcription factor, T-box, conserved site, and Helix-turn-helix motif network (Scleropages formosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBX3	T-box transcription factor TBX3-like. (710 aa)
	ENSSFOP00015009802	annotation not available (491 aa)
	Cfap54	Uncharacterized protein. (2447 aa)
	foxf1	Forkhead box protein F1-like. (382 aa)
	TBX22	T-box transcription factor TBX22-like. (498 aa)
	nkx2-6	Homeobox domain-containing protein. (295 aa)
	prom1	Prominin-1-A-like. (882 aa)
	Foxf2	Forkhead box protein F2-like. (381 aa)
	LOC108927185	T-box transcription factor TBX5-A-like. (514 aa)
	LOC108927186	T-box transcription factor TBX3-like. (695 aa)
	LOC108925541	Homeobox protein BarH-like 1-like. (274 aa)
	PRRX2	Uncharacterized protein. (247 aa)
	hand2	Heart-and neural crest derivatives-expressed protein 2-like. (204 aa)
	LOC108926232	Forkhead box protein F1-like. (374 aa)
	TBX4	T-box transcription factor TBX4-like. (441 aa)
	LOC108933590	Homeobox protein Nkx-2.3-like. (338 aa)
	shox2	Short stature homeobox protein 2-like. (286 aa)
	tbx1	T-box transcription factor TBX1-like. (485 aa)
	Z043_106074	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like. (1153 aa)
	Z043_112547	Uncharacterized protein. (309 aa)
	tbx18	T-box transcription factor TBX18-like. (563 aa)
	slc25a24	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (480 aa)
	Z043_105803	Uncharacterized protein. (297 aa)
	Z043_123432	Heart-and neural crest derivatives-expressed protein 2-like. (188 aa)
	nkx3-2	Homeobox domain-containing protein. (290 aa)
	LOC108942633	Homeobox domain-containing protein. (266 aa)
	HCN4	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like. (1277 aa)
	tbx4	T-box 4-like. (597 aa)
	hoxd12	Hox-D12a-like. (271 aa)
	LOC108933104	Uncharacterized protein. (444 aa)
	Barx1	Homeobox domain-containing protein. (251 aa)
	LOC108934704	Uncharacterized protein. (369 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Barx1	nkx3-2	ENSSFOP00015074914	ENSSFOP00015059344	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
Cfap54	ENSSFOP00015009802	ENSSFOP00015009854	ENSSFOP00015009802	Uncharacterized protein.	annotation not available	0.899
Cfap54	LOC108933104	ENSSFOP00015009854	ENSSFOP00015073323	Uncharacterized protein.	Uncharacterized protein.	0.451
Cfap54	Z043_105803	ENSSFOP00015009854	ENSSFOP00015051993	Uncharacterized protein.	Uncharacterized protein.	0.451
Cfap54	tbx1	ENSSFOP00015009854	ENSSFOP00015043993	Uncharacterized protein.	T-box transcription factor TBX1-like.	0.451
ENSSFOP00015009802	Cfap54	ENSSFOP00015009802	ENSSFOP00015009854	annotation not available	Uncharacterized protein.	0.899
ENSSFOP00015009802	LOC108933104	ENSSFOP00015009802	ENSSFOP00015073323	annotation not available	Uncharacterized protein.	0.451
ENSSFOP00015009802	Z043_105803	ENSSFOP00015009802	ENSSFOP00015051993	annotation not available	Uncharacterized protein.	0.451
ENSSFOP00015009802	tbx1	ENSSFOP00015009802	ENSSFOP00015043993	annotation not available	T-box transcription factor TBX1-like.	0.451
Foxf2	nkx3-2	ENSSFOP00015021639	ENSSFOP00015059344	Forkhead box protein F2-like.	Homeobox domain-containing protein.	0.466
HCN4	shox2	ENSSFOP00015061978	ENSSFOP00015043198	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like.	Short stature homeobox protein 2-like.	0.469
LOC108925541	nkx3-2	ENSSFOP00015024242	ENSSFOP00015059344	Homeobox protein BarH-like 1-like.	Homeobox domain-containing protein.	0.420
LOC108926232	nkx3-2	ENSSFOP00015031340	ENSSFOP00015059344	Forkhead box protein F1-like.	Homeobox domain-containing protein.	0.466
LOC108927185	hand2	ENSSFOP00015023562	ENSSFOP00015030894	T-box transcription factor TBX5-A-like.	Heart-and neural crest derivatives-expressed protein 2-like.	0.524
LOC108927186	shox2	ENSSFOP00015023597	ENSSFOP00015043198	T-box transcription factor TBX3-like.	Short stature homeobox protein 2-like.	0.439
LOC108933104	Cfap54	ENSSFOP00015073323	ENSSFOP00015009854	Uncharacterized protein.	Uncharacterized protein.	0.451
LOC108933104	ENSSFOP00015009802	ENSSFOP00015073323	ENSSFOP00015009802	Uncharacterized protein.	annotation not available	0.451
PRRX2	TBX4	ENSSFOP00015026309	ENSSFOP00015034853	Uncharacterized protein.	T-box transcription factor TBX4-like.	0.471
PRRX2	tbx4	ENSSFOP00015026309	ENSSFOP00015062765	Uncharacterized protein.	T-box 4-like.	0.471
TBX3	shox2	ENSSFOP00015008407	ENSSFOP00015043198	T-box transcription factor TBX3-like.	Short stature homeobox protein 2-like.	0.439