47 items (Scleropages formosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ar	Androgen receptor-like. (834 aa)
	Rtraf	UPF0568 protein C14orf166-like. (244 aa)
	ercc1	DNA excision repair protein ERCC-1-like. (335 aa)
	rprd1a	Regulation of nuclear pre-mRNA domain-containing protein 1A-like. (312 aa)
	GTF2A1	Transcription initiation factor IIA subunit 1-like isoform X1. (359 aa)
	cdc73	CDC73_C domain-containing protein. (537 aa)
	leo1	RNA polymerase-associated protein LEO1-like. (674 aa)
	Z043_124110	DBC1 domain-containing protein. (793 aa)
	uri1	Unconventional prefoldin RPB5 interactor 1-like. (484 aa)
	wac	WW domain-containing adapter protein with coiled-coil-like. (547 aa)
	dhx9	Uncharacterized protein. (1261 aa)
	paf1	RNA polymerase II-associated factor 1-like. (534 aa)
	uvssa	Uncharacterized protein. (713 aa)
	Z043_121963	CID domain-containing protein. (714 aa)
	rprd1b	Regulation of nuclear pre-mRNA domain-containing protein 1B. (335 aa)
	ENSSFOP00015031215	Zinc finger protein 326. (408 aa)
	drap1	Dr1-associated corepressor-like. (224 aa)
	rprd2	CID domain-containing protein. (1331 aa)
	LOC108922259	General transcription factor IIA, 1, 19/37kDa-like. (367 aa)
	Z043_124132	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (510 aa)
	smyd3	[histone H3]-lysine4/36 N-trimethyltransferase SMYD. (431 aa)
	supt4h1	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
	Z043_105219	Nucleolar protein 58-like. (547 aa)
	LOC108939943	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (90 aa)
	LOC108922058	N-lysine methyltransferase SMYD2-like. (436 aa)
	Z043_102310	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (594 aa)
	Taf7l	Transcription initiation factor TFIID subunit 7-like. (369 aa)
	elof1	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (92 aa)
	ZNHIT6	Box C/D snoRNA protein 1-like. (284 aa)
	gtf2a2	Transcription initiation factor IIA subunit 2-like. (109 aa)
	ctr9	RNA polymerase-associated protein CTR9-like. (1159 aa)
	bivm	Basic immunoglobulin-like variable motif-containing protein. (555 aa)
	ercc4	DNA repair endonuclease XPF-like. (909 aa)
	gtf2b	Transcription initiation factor IIB-like. (319 aa)
	LOC108925858	LisH domain-containing protein. (783 aa)
	ctdp1	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (987 aa)
	wdr43	WD repeat-containing protein 43-like. (734 aa)
	SCAF8	Protein SCAF8-like. (1234 aa)
	rtf1	RNA polymerase-associated protein RTF1-like. (679 aa)
	ercc5	DNA repair protein complementing XP-G cells-like. (1077 aa)
	LOC108937609	WW domain-containing adapter protein with coiled-coil-like. (542 aa)
	Llph	Protein LLP-like. (192 aa)
	pcf11	Pre-mRNA cleavage complex 2 protein Pcf11-like. (1560 aa)
	LOC108934435	Uncharacterized protein. (1972 aa)
	FBF1	Fas-binding factor 1-like. (1185 aa)
	LOC108929238	WD repeat-containing protein 43-like. (699 aa)
	pcif1	Phosphorylated CTD-interacting factor 1-like. (717 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFOP00015031215	Z043_124110	ENSSFOP00015031215	ENSSFOP00015019978	Zinc finger protein 326.	DBC1 domain-containing protein.	0.454
FBF1	SCAF8	ENSSFOP00015006375	ENSSFOP00015014781	Fas-binding factor 1-like.	Protein SCAF8-like.	0.533
FBF1	Z043_102310	ENSSFOP00015006375	ENSSFOP00015055591	Fas-binding factor 1-like.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.584
FBF1	Z043_121963	ENSSFOP00015006375	ENSSFOP00015030779	Fas-binding factor 1-like.	CID domain-containing protein.	0.697
FBF1	ctdp1	ENSSFOP00015006375	ENSSFOP00015077547	Fas-binding factor 1-like.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.523
FBF1	leo1	ENSSFOP00015006375	ENSSFOP00015019533	Fas-binding factor 1-like.	RNA polymerase-associated protein LEO1-like.	0.476
FBF1	pcf11	ENSSFOP00015006375	ENSSFOP00015008533	Fas-binding factor 1-like.	Pre-mRNA cleavage complex 2 protein Pcf11-like.	0.725
FBF1	rprd2	ENSSFOP00015006375	ENSSFOP00015034606	Fas-binding factor 1-like.	CID domain-containing protein.	0.697
FBF1	supt4h1	ENSSFOP00015006375	ENSSFOP00015045624	Fas-binding factor 1-like.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.467
GTF2A1	LOC108922259	ENSSFOP00015017870	ENSSFOP00015035024	Transcription initiation factor IIA subunit 1-like isoform X1.	General transcription factor IIA, 1, 19/37kDa-like.	0.901
GTF2A1	LOC108934435	ENSSFOP00015017870	ENSSFOP00015006614	Transcription initiation factor IIA subunit 1-like isoform X1.	Uncharacterized protein.	0.816
GTF2A1	Taf7l	ENSSFOP00015017870	ENSSFOP00015059204	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 7-like.	0.828
GTF2A1	Z043_124132	ENSSFOP00015017870	ENSSFOP00015037489	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.926
GTF2A1	gtf2a2	ENSSFOP00015017870	ENSSFOP00015066274	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor IIA subunit 2-like.	0.959
GTF2A1	gtf2b	ENSSFOP00015017870	ENSSFOP00015070635	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor IIB-like.	0.947
LOC108922259	GTF2A1	ENSSFOP00015035024	ENSSFOP00015017870	General transcription factor IIA, 1, 19/37kDa-like.	Transcription initiation factor IIA subunit 1-like isoform X1.	0.901
LOC108922259	LOC108934435	ENSSFOP00015035024	ENSSFOP00015006614	General transcription factor IIA, 1, 19/37kDa-like.	Uncharacterized protein.	0.816
LOC108922259	Taf7l	ENSSFOP00015035024	ENSSFOP00015059204	General transcription factor IIA, 1, 19/37kDa-like.	Transcription initiation factor TFIID subunit 7-like.	0.828
LOC108922259	Z043_124132	ENSSFOP00015035024	ENSSFOP00015037489	General transcription factor IIA, 1, 19/37kDa-like.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.926
LOC108922259	gtf2a2	ENSSFOP00015035024	ENSSFOP00015066274	General transcription factor IIA, 1, 19/37kDa-like.	Transcription initiation factor IIA subunit 2-like.	0.972