37 items (Scleropages formosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108924419	Neuropeptide Y receptor type 2-like; Belongs to the G-protein coupled receptor 1 family. (406 aa)
	Z043_117129	Neuropeptide Y receptor type 2-like; Belongs to the G-protein coupled receptor 1 family. (479 aa)
	TNNC1	Troponin C, slow skeletal and cardiac muscles-like. (161 aa)
	zfpm2	Zinc finger protein ZFPM2-like. (1150 aa)
	LOC108922717	Cardiac troponin I-like. (183 aa)
	SFRP2	Secreted frizzled-related protein 2-like. (293 aa)
	SMAD4	Mothers against decapentaplegic homolog. (551 aa)
	Hace1	E3 ubiquitin-protein ligase HACE1-like. (916 aa)
	ENSSFOP00015016717	Troponin C, slow skeletal and cardiac muscles-like. (174 aa)
	HAND1	Heart-and neural crest derivatives-expressed protein 1-like. (196 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1799 aa)
	NPY5R	Neuropeptide Y receptor type 5-like. (450 aa)
	LOC108933453	TGF-beta1B-like. (383 aa)
	LOC108927185	T-box transcription factor TBX5-A-like. (514 aa)
	LOC108924426	Secreted frizzled-related protein 2-like. (302 aa)
	LOC108942035	PAS domain-containing protein. (779 aa)
	EDNRA	Endothelin-1 receptor-like; Belongs to the G-protein coupled receptor 1 family. (479 aa)
	LOC108941156	Aryl hydrocarbon receptor nuclear translocator 2-like. (713 aa)
	nkx2-5	Homeobox protein Nkx-2.5-like. (307 aa)
	ENSSFOP00015029952	Uncharacterized protein LOC114911893. (154 aa)
	LOC108927863	Zinc finger protein ZFPM2-like. (1130 aa)
	LOC108925152	Aryl hydrocarbon receptor nuclear translocator-like. (782 aa)
	tgfbr2	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (563 aa)
	Z043_106307	Troponin I, slow skeletal muscle-like. (188 aa)
	npy2r	Neuropeptide Y receptor type 2-like; Belongs to the G-protein coupled receptor 1 family. (345 aa)
	ptcd2	Pentatricopeptide repeat-containing protein 2, mitochondrial-like. (381 aa)
	sema3c	Semaphorin-3C-like; Belongs to the semaphorin family. (792 aa)
	cpe	Carboxypeptidase E-like. (468 aa)
	LOC108942527	Mothers against decapentaplegic homolog. (559 aa)
	LOC108924734	TGF beta-1-like. (382 aa)
	LOC108928232	Growth/differentiation factor 8-like. (399 aa)
	LOC108932225	Secreted frizzled-related protein 2-like. (308 aa)
	LOC108924228	Myostatin-like. (366 aa)
	EDNRA-2	G_PROTEIN_RECEP_F1_2 domain-containing protein. (434 aa)
	LOC108941913	Mothers against decapentaplegic homolog 4-like. (564 aa)
	TBX5	Uncharacterized protein. (521 aa)
	fgf8	Fibroblast growth factor 8. (208 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDNRA	EDNRA-2	ENSSFOP00015025410	ENSSFOP00015059180	Endothelin-1 receptor-like; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.902
EDNRA-2	EDNRA	ENSSFOP00015059180	ENSSFOP00015025410	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Endothelin-1 receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.902
ENSSFOP00015016717	LOC108922717	ENSSFOP00015016717	ENSSFOP00015010958	Troponin C, slow skeletal and cardiac muscles-like.	Cardiac troponin I-like.	0.898
ENSSFOP00015016717	TNNC1	ENSSFOP00015016717	ENSSFOP00015003151	Troponin C, slow skeletal and cardiac muscles-like.	Troponin C, slow skeletal and cardiac muscles-like.	0.901
ENSSFOP00015016717	Z043_106307	ENSSFOP00015016717	ENSSFOP00015035906	Troponin C, slow skeletal and cardiac muscles-like.	Troponin I, slow skeletal muscle-like.	0.898
ENSSFOP00015029952	nkx2-5	ENSSFOP00015029952	ENSSFOP00015027873	Uncharacterized protein LOC114911893.	Homeobox protein Nkx-2.5-like.	0.450
HAND1	nkx2-5	ENSSFOP00015016974	ENSSFOP00015027873	Heart-and neural crest derivatives-expressed protein 1-like.	Homeobox protein Nkx-2.5-like.	0.492
LOC108922717	ENSSFOP00015016717	ENSSFOP00015010958	ENSSFOP00015016717	Cardiac troponin I-like.	Troponin C, slow skeletal and cardiac muscles-like.	0.898
LOC108922717	TNNC1	ENSSFOP00015010958	ENSSFOP00015003151	Cardiac troponin I-like.	Troponin C, slow skeletal and cardiac muscles-like.	0.898
LOC108924228	LOC108928232	ENSSFOP00015056699	ENSSFOP00015049396	Myostatin-like.	Growth/differentiation factor 8-like.	0.901
LOC108924228	tgfbr2	ENSSFOP00015056699	ENSSFOP00015035320	Myostatin-like.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.470
LOC108924419	NPY5R	ENSSFOP00015023608	ENSSFOP00015022049	Neuropeptide Y receptor type 2-like; Belongs to the G-protein coupled receptor 1 family.	Neuropeptide Y receptor type 5-like.	0.429
LOC108924734	LOC108933453	ENSSFOP00015049261	ENSSFOP00015023510	TGF beta-1-like.	TGF-beta1B-like.	0.901
LOC108924734	LOC108941913	ENSSFOP00015049261	ENSSFOP00015064750	TGF beta-1-like.	Mothers against decapentaplegic homolog 4-like.	0.624
LOC108924734	LOC108942527	ENSSFOP00015049261	ENSSFOP00015047412	TGF beta-1-like.	Mothers against decapentaplegic homolog.	0.624
LOC108924734	SMAD4	ENSSFOP00015049261	ENSSFOP00015015148	TGF beta-1-like.	Mothers against decapentaplegic homolog.	0.624
LOC108924734	tgfbr2	ENSSFOP00015049261	ENSSFOP00015035320	TGF beta-1-like.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.996
LOC108925152	med1	ENSSFOP00015034783	ENSSFOP00015018185	Aryl hydrocarbon receptor nuclear translocator-like.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.435
LOC108927185	nkx2-5	ENSSFOP00015023562	ENSSFOP00015027873	T-box transcription factor TBX5-A-like.	Homeobox protein Nkx-2.5-like.	0.818
LOC108928232	LOC108924228	ENSSFOP00015049396	ENSSFOP00015056699	Growth/differentiation factor 8-like.	Myostatin-like.	0.901