29 items (Scleropages formosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gtf2e1	General transcription factor IIE subunit 1-like. (449 aa)
	TAF6	Transcription initiation factor TFIID subunit 6-like. (689 aa)
	Z043_102220	Transcription initiation factor TFIID subunit 3-like. (914 aa)
	Z043_124132	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (510 aa)
	Z043_105766	Transcription initiation factor TFIID subunit 3-like. (948 aa)
	LOC108918651	Transcription initiation factor TFIID subunit 6-like. (668 aa)
	tbp	TATA-box-binding protein-like. (316 aa)
	taf10	Transcription initiation factor TFIID subunit 10-like. (191 aa)
	taf13	Transcription initiation factor TFIID subunit 13-like. (124 aa)
	LOC108920015	Transcription initiation factor TFIID subunit 9-like. (253 aa)
	LOC108922259	General transcription factor IIA, 1, 19/37kDa-like. (367 aa)
	TAF4B	Transcription initiation factor TFIID subunit 4-like. (1169 aa)
	GTF2A1	Transcription initiation factor IIA subunit 1-like isoform X1. (359 aa)
	Taf8	Transcription initiation factor TFIID subunit 8-like. (310 aa)
	gtf2h4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
	gtf2b	Transcription initiation factor IIB-like. (319 aa)
	gtf2a2	Transcription initiation factor IIA subunit 2-like. (109 aa)
	LOC108926245	TAFH domain-containing protein. (1056 aa)
	Taf7l	Transcription initiation factor TFIID subunit 7-like. (369 aa)
	LOC108932948	Transcription initiation factor TFIID subunit 4-like. (1048 aa)
	ercc2	TFIIH basal transcription factor complex helicase XPD subunit-like. (760 aa)
	Taf2	Transcription initiation factor TFIID subunit 2-like. (1220 aa)
	Z043_113326	Transcription initiation factor TFIID subunit 4-like. (1008 aa)
	LOC108934435	Uncharacterized protein. (1972 aa)
	gtf2e2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (290 aa)
	taf11	Transcription initiation factor TFIID subunit 11-like. (205 aa)
	taf6l	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like. (700 aa)
	gtf2h3	General transcription factor IIH subunit 3-like. (301 aa)
	taf12	Transcription initiation factor TFIID subunit 12-like. (165 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GTF2A1	LOC108918651	ENSSFOP00015017870	ENSSFOP00015039771	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 6-like.	0.794
GTF2A1	LOC108920015	ENSSFOP00015017870	ENSSFOP00015015127	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 9-like.	0.830
GTF2A1	LOC108922259	ENSSFOP00015017870	ENSSFOP00015035024	Transcription initiation factor IIA subunit 1-like isoform X1.	General transcription factor IIA, 1, 19/37kDa-like.	0.901
GTF2A1	LOC108926245	ENSSFOP00015017870	ENSSFOP00015062761	Transcription initiation factor IIA subunit 1-like isoform X1.	TAFH domain-containing protein.	0.769
GTF2A1	LOC108932948	ENSSFOP00015017870	ENSSFOP00015053912	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 4-like.	0.769
GTF2A1	LOC108934435	ENSSFOP00015017870	ENSSFOP00015006614	Transcription initiation factor IIA subunit 1-like isoform X1.	Uncharacterized protein.	0.816
GTF2A1	TAF4B	ENSSFOP00015017870	ENSSFOP00015015894	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 4-like.	0.769
GTF2A1	TAF6	ENSSFOP00015017870	ENSSFOP00015036253	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 6-like.	0.794
GTF2A1	Taf2	ENSSFOP00015017870	ENSSFOP00015007411	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 2-like.	0.868
GTF2A1	Taf7l	ENSSFOP00015017870	ENSSFOP00015059204	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 7-like.	0.828
GTF2A1	Taf8	ENSSFOP00015017870	ENSSFOP00015020661	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 8-like.	0.811
GTF2A1	Z043_102220	ENSSFOP00015017870	ENSSFOP00015037437	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 3-like.	0.724
GTF2A1	Z043_105766	ENSSFOP00015017870	ENSSFOP00015037686	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 3-like.	0.724
GTF2A1	Z043_113326	ENSSFOP00015017870	ENSSFOP00015007079	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor TFIID subunit 4-like.	0.769
GTF2A1	Z043_124132	ENSSFOP00015017870	ENSSFOP00015037489	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.926
GTF2A1	ercc2	ENSSFOP00015017870	ENSSFOP00015009696	Transcription initiation factor IIA subunit 1-like isoform X1.	TFIIH basal transcription factor complex helicase XPD subunit-like.	0.894
GTF2A1	gtf2a2	ENSSFOP00015017870	ENSSFOP00015066274	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor IIA subunit 2-like.	0.959
GTF2A1	gtf2b	ENSSFOP00015017870	ENSSFOP00015070635	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor IIB-like.	0.947
GTF2A1	gtf2e1	ENSSFOP00015017870	ENSSFOP00015015716	Transcription initiation factor IIA subunit 1-like isoform X1.	General transcription factor IIE subunit 1-like.	0.938
GTF2A1	gtf2e2	ENSSFOP00015017870	ENSSFOP00015000472	Transcription initiation factor IIA subunit 1-like isoform X1.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.932