33 items (Scleropages formosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ctr9	RNA polymerase-associated protein CTR9-like. (1159 aa)
	LOC108941599	Cyclin-dependent kinase 12-like. (1473 aa)
	tcea1	Uncharacterized protein. (318 aa)
	LOC108930646	FACT complex subunit SPT16-like. (1163 aa)
	polr2i	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
	eloa	Transcription elongation factor B polypeptide 3-like. (673 aa)
	LOC108935875	Transcription elongation factor A protein 3-like isoform X1. (525 aa)
	wdr61	WD repeat-containing protein 61-like. (305 aa)
	ell3	RNA polymerase II elongation factor ELL2-like. (601 aa)
	paf1	RNA polymerase II-associated factor 1-like. (534 aa)
	adrm1	RPN13_C domain-containing protein. (417 aa)
	LOC108932810	Uncharacterized protein. (600 aa)
	leo1	RNA polymerase-associated protein LEO1-like. (674 aa)
	cdc73	CDC73_C domain-containing protein. (537 aa)
	LOC108940624	Transcription and mRNA export factor ENY2-like isoform X1. (96 aa)
	ENY2	Uncharacterized protein. (125 aa)
	pcid2	PCI domain-containing protein 2-like. (409 aa)
	rtf1	RNA polymerase-associated protein RTF1-like. (679 aa)
	supt5h	Transcription elongation factor SPT5-like. (1084 aa)
	Supt6h	Transcription elongation factor SPT6-like. (1664 aa)
	ell	Uncharacterized protein. (632 aa)
	setd2	Histone-lysine N-methyltransferase SETD2-like. (2876 aa)
	ELOB	Transcription elongation factor B polypeptide 2-like. (177 aa)
	Z043_124132	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (510 aa)
	LOC108925657	Transcription elongation factor A protein 2-like. (322 aa)
	CDK13	Cyclin-dependent kinase 13-like. (1280 aa)
	CDK13-2	Protein kinase domain-containing protein. (1411 aa)
	LOC108926448	Proteasomal ubiquitin receptor ADRM1-like. (429 aa)
	LOC108939943	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (90 aa)
	LOC108921416	RNA polymerase II elongation factor ELL-like. (562 aa)
	LOC108937855	FACT complex subunit SPT16-like. (1058 aa)
	elof1	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (92 aa)
	LOC108919432	Transcription elongation factor B polypeptide 2-like. (119 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDK13	LOC108921416	ENSSFOP00015042094	ENSSFOP00015055547	Cyclin-dependent kinase 13-like.	RNA polymerase II elongation factor ELL-like.	0.479
CDK13	LOC108925657	ENSSFOP00015042094	ENSSFOP00015039951	Cyclin-dependent kinase 13-like.	Transcription elongation factor A protein 2-like.	0.577
CDK13	LOC108930646	ENSSFOP00015042094	ENSSFOP00015035543	Cyclin-dependent kinase 13-like.	FACT complex subunit SPT16-like.	0.617
CDK13	LOC108932810	ENSSFOP00015042094	ENSSFOP00015020800	Cyclin-dependent kinase 13-like.	Uncharacterized protein.	0.507
CDK13	LOC108935875	ENSSFOP00015042094	ENSSFOP00015034799	Cyclin-dependent kinase 13-like.	Transcription elongation factor A protein 3-like isoform X1.	0.577
CDK13	LOC108937855	ENSSFOP00015042094	ENSSFOP00015059236	Cyclin-dependent kinase 13-like.	FACT complex subunit SPT16-like.	0.617
CDK13	Supt6h	ENSSFOP00015042094	ENSSFOP00015008416	Cyclin-dependent kinase 13-like.	Transcription elongation factor SPT6-like.	0.532
CDK13	cdc73	ENSSFOP00015042094	ENSSFOP00015018641	Cyclin-dependent kinase 13-like.	CDC73_C domain-containing protein.	0.657
CDK13	ctr9	ENSSFOP00015042094	ENSSFOP00015068494	Cyclin-dependent kinase 13-like.	RNA polymerase-associated protein CTR9-like.	0.464
CDK13	ell	ENSSFOP00015042094	ENSSFOP00015005184	Cyclin-dependent kinase 13-like.	Uncharacterized protein.	0.479
CDK13	ell3	ENSSFOP00015042094	ENSSFOP00015030973	Cyclin-dependent kinase 13-like.	RNA polymerase II elongation factor ELL2-like.	0.479
CDK13	eloa	ENSSFOP00015042094	ENSSFOP00015035324	Cyclin-dependent kinase 13-like.	Transcription elongation factor B polypeptide 3-like.	0.507
CDK13	leo1	ENSSFOP00015042094	ENSSFOP00015019533	Cyclin-dependent kinase 13-like.	RNA polymerase-associated protein LEO1-like.	0.650
CDK13	polr2i	ENSSFOP00015042094	ENSSFOP00015035358	Cyclin-dependent kinase 13-like.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.636
CDK13	rtf1	ENSSFOP00015042094	ENSSFOP00015011966	Cyclin-dependent kinase 13-like.	RNA polymerase-associated protein RTF1-like.	0.494
CDK13	setd2	ENSSFOP00015042094	ENSSFOP00015002313	Cyclin-dependent kinase 13-like.	Histone-lysine N-methyltransferase SETD2-like.	0.698
CDK13	supt5h	ENSSFOP00015042094	ENSSFOP00015009160	Cyclin-dependent kinase 13-like.	Transcription elongation factor SPT5-like.	0.906
CDK13	tcea1	ENSSFOP00015042094	ENSSFOP00015036523	Cyclin-dependent kinase 13-like.	Uncharacterized protein.	0.577
CDK13-2	LOC108921416	ENSSFOP00015051393	ENSSFOP00015055547	Protein kinase domain-containing protein.	RNA polymerase II elongation factor ELL-like.	0.479
CDK13-2	LOC108925657	ENSSFOP00015051393	ENSSFOP00015039951	Protein kinase domain-containing protein.	Transcription elongation factor A protein 2-like.	0.577