STRINGSTRING
Z043_103267 Z043_103267 LOC108933392 LOC108933392 CTNNB1 CTNNB1 fermt2 fermt2 Z043_124384 Z043_124384 ENSSFOP00015014887 ENSSFOP00015014887 scn4b scn4b LOC108918758 LOC108918758 LOC108930334 LOC108930334 cxadr cxadr GJA5 GJA5 GJA5-2 GJA5-2 Z043_100542 Z043_100542 Akap6 Akap6 LOC108939667 LOC108939667 Z043_119590 Z043_119590 VCL VCL LOC108919194 LOC108919194 LOC108927865 LOC108927865 Z043_104652 Z043_104652 CDH2 CDH2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z043_103267Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (894 aa)
LOC108933392Sodium channel beta-1 subunit-like. (223 aa)
CTNNB1Catenin beta 1. (792 aa)
fermt2Fermitin family2-like. (741 aa)
Z043_124384Uncharacterized protein. (205 aa)
ENSSFOP00015014887annotation not available (334 aa)
scn4bSodium channel subunit beta-4-like. (232 aa)
LOC108918758Junction plakoglobin-like. (730 aa)
LOC108930334FXYD domain-containing ion transport regulator; Belongs to the FXYD family. (83 aa)
cxadrCoxsackievirus and adenovirus receptor-like. (390 aa)
GJA5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (362 aa)
GJA5-2Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (370 aa)
Z043_100542Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (435 aa)
Akap6Uncharacterized protein. (2141 aa)
LOC108939667Vinculin-like. (1138 aa)
Z043_119590Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (381 aa)
VCLVinculin-like. (1133 aa)
LOC108919194Sodium channel subunit beta-1-like. (221 aa)
LOC108927865Catenin beta-1-like. (779 aa)
Z043_104652Nebulin-related-anchoring protein-like. (1738 aa)
CDH2Cadherin 2, type 1, N-cadherin. (1014 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.