38 items (Scleropages formosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mpp5	MAGUK p55 subfamily member 5-A-like; Belongs to the MAGUK family. (705 aa)
	Z043_125355	Uncharacterized protein. (856 aa)
	LOC108941156	Aryl hydrocarbon receptor nuclear translocator 2-like. (713 aa)
	LOC108942035	PAS domain-containing protein. (779 aa)
	nme5	NDK domain-containing protein; Belongs to the NDK family. (211 aa)
	Z043_121352	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (371 aa)
	RAPGEF2	Rap guanine nucleotide exchange factor 2-like. (1644 aa)
	mnat1	CDK-activating kinase assembly factor MAT1-like. (310 aa)
	LOC108925987	Coiled-coil domain-containing protein 134-like. (230 aa)
	ENSSFOP00015018273	annotation not available (78 aa)
	dicer1	Uncharacterized protein. (1920 aa)
	med12	Mediator of RNA polymerase II transcription subunit 12-like. (2102 aa)
	LOC108935260	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (590 aa)
	numbl	Protein numb-like. (689 aa)
	LOC108925439	Centromere protein F-like. (1971 aa)
	LOC108919627	Protein numb-like. (677 aa)
	LOC108939183	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (370 aa)
	dpcd	Uncharacterized protein. (203 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (349 aa)
	rpgrip1l	Protein fantom-like. (1274 aa)
	Z043_112106	Uncharacterized protein. (1332 aa)
	LOC108927636	Armadillo repeat-containing protein 4-like. (676 aa)
	mecp2	MBD domain-containing protein. (568 aa)
	Bbs4	Bardet-Biedl syndrome 4 protein-like. (518 aa)
	Z043_103267	Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (894 aa)
	LOC108924130	Uncharacterized protein. (710 aa)
	CDH2	Cadherin 2, type 1, N-cadherin. (1014 aa)
	LOC108924076	Protein numb-like. (647 aa)
	Z043_115373	Uncharacterized protein. (581 aa)
	Z043_123663	Uncharacterized protein. (4359 aa)
	Slc7a11	Cystine/glutamate transporter-like. (552 aa)
	ENSSFOP00015044047	annotation not available (477 aa)
	rfng	Beta-1,3-N-acetylglucosaminyltransferase radical fringe-like. (406 aa)
	LOC108920843	Uncharacterized protein. (497 aa)
	ttc21b	Uncharacterized protein. (1320 aa)
	LOC108925152	Aryl hydrocarbon receptor nuclear translocator-like. (782 aa)
	LOC108937482	Aquaporin 1-like; Belongs to the MIP/aquaporin (TC 1.A.8) family. (262 aa)
	Z043_109984	Centromere protein F-like. (2632 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bbs4	Z043_115373	ENSSFOP00015065776	ENSSFOP00015055005	Bardet-Biedl syndrome 4 protein-like.	Uncharacterized protein.	0.990
Bbs4	rpgrip1l	ENSSFOP00015065776	ENSSFOP00015001890	Bardet-Biedl syndrome 4 protein-like.	Protein fantom-like.	0.504
Bbs4	ttc21b	ENSSFOP00015065776	ENSSFOP00015035456	Bardet-Biedl syndrome 4 protein-like.	Uncharacterized protein.	0.575
CDH2	Z043_103267	ENSSFOP00015056898	ENSSFOP00015062442	Cadherin 2, type 1, N-cadherin.	Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins.	0.900
ENSSFOP00015044047	LOC108919627	ENSSFOP00015044047	ENSSFOP00015009896	annotation not available	Protein numb-like.	0.614
ENSSFOP00015044047	LOC108924076	ENSSFOP00015044047	ENSSFOP00015056649	annotation not available	Protein numb-like.	0.614
ENSSFOP00015044047	numbl	ENSSFOP00015044047	ENSSFOP00015011867	annotation not available	Protein numb-like.	0.614
LOC108919627	ENSSFOP00015044047	ENSSFOP00015009896	ENSSFOP00015044047	Protein numb-like.	annotation not available	0.614
LOC108919627	LOC108924076	ENSSFOP00015009896	ENSSFOP00015056649	Protein numb-like.	Protein numb-like.	0.901
LOC108919627	LOC108935260	ENSSFOP00015009896	ENSSFOP00015013505	Protein numb-like.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.614
LOC108919627	numbl	ENSSFOP00015009896	ENSSFOP00015011867	Protein numb-like.	Protein numb-like.	0.903
LOC108920843	Slc7a11	ENSSFOP00015036242	ENSSFOP00015046803	Uncharacterized protein.	Cystine/glutamate transporter-like.	0.902
LOC108924076	ENSSFOP00015044047	ENSSFOP00015056649	ENSSFOP00015044047	Protein numb-like.	annotation not available	0.614
LOC108924076	LOC108919627	ENSSFOP00015056649	ENSSFOP00015009896	Protein numb-like.	Protein numb-like.	0.901
LOC108924076	LOC108935260	ENSSFOP00015056649	ENSSFOP00015013505	Protein numb-like.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.614
LOC108924076	numbl	ENSSFOP00015056649	ENSSFOP00015011867	Protein numb-like.	Protein numb-like.	0.903
LOC108924130	mpp5	ENSSFOP00015056946	ENSSFOP00015031498	Uncharacterized protein.	MAGUK p55 subfamily member 5-A-like; Belongs to the MAGUK family.	0.901
LOC108935260	LOC108919627	ENSSFOP00015013505	ENSSFOP00015009896	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Protein numb-like.	0.614
LOC108935260	LOC108924076	ENSSFOP00015013505	ENSSFOP00015056649	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Protein numb-like.	0.614
LOC108935260	numbl	ENSSFOP00015013505	ENSSFOP00015011867	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Protein numb-like.	0.614