STRINGSTRING
ndnf ndnf SIM2 SIM2 sim1 sim1 LOC108940035 LOC108940035 LOC108929261 LOC108929261 LOC108925152 LOC108925152 LOC108920686 LOC108920686 LOC108941156 LOC108941156 LOC108942035 LOC108942035 LGR4 LGR4 LOC108918230 LOC108918230
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ndnfProtein NDNF-like. (572 aa)
SIM2Single-minded2-like. (729 aa)
sim1PAS domain-containing protein. (725 aa)
LOC108940035Leucine-rich repeat-containing G-protein coupled receptor 4-like isoform X2. (949 aa)
LOC108929261Single-minded1-like. (728 aa)
LOC108925152Aryl hydrocarbon receptor nuclear translocator-like. (782 aa)
LOC108920686Neuropilin-2-like. (929 aa)
LOC108941156Aryl hydrocarbon receptor nuclear translocator 2-like. (713 aa)
LOC108942035PAS domain-containing protein. (779 aa)
LGR4Leucine-rich repeat-containing G-protein coupled receptor 4-like. (896 aa)
LOC108918230Neuropilin-2-like. (926 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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