(12 nodes) Lipid glycosylation network (Scleropages formosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	a3galt2	Uncharacterized protein. (365 aa)
	A3GALT2	Alpha-1,3-galactosyltransferase 2-like. (368 aa)
	gba	Glucosylceramidase. (563 aa)
	slc35c1	GDP-fucose transporter 1-like. (360 aa)
	Z043_122908	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like. (323 aa)
	GBGT1	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like. (354 aa)
	tmem130	Transmembrane protein 130-like. (343 aa)
	b4galnt1	Glyco_trans_2-like domain-containing protein. (530 aa)
	LOC108932369	CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like isoform X1. (425 aa)
	ST3GAL4	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (397 aa)
	Gba2	Uncharacterized protein. (889 aa)
	LOC108939037	Beta-1,4 N-acetylgalactosaminyltransferase 1-like. (526 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A3GALT2	a3galt2	ENSSFOP00015048099	ENSSFOP00015043673	Alpha-1,3-galactosyltransferase 2-like.	Uncharacterized protein.	0.901
GBGT1	Z043_122908	ENSSFOP00015079055	ENSSFOP00015071321	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.	0.902
Gba2	gba	ENSSFOP00015006982	ENSSFOP00015049649	Uncharacterized protein.	Glucosylceramidase.	0.936
LOC108932369	ST3GAL4	ENSSFOP00015013640	ENSSFOP00015035007	CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like isoform X1.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.904
LOC108939037	b4galnt1	ENSSFOP00015006604	ENSSFOP00015022802	Beta-1,4 N-acetylgalactosaminyltransferase 1-like.	Glyco_trans_2-like domain-containing protein.	0.901
ST3GAL4	LOC108932369	ENSSFOP00015035007	ENSSFOP00015013640	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like isoform X1.	0.904
Z043_122908	GBGT1	ENSSFOP00015071321	ENSSFOP00015079055	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.	0.902
a3galt2	A3GALT2	ENSSFOP00015043673	ENSSFOP00015048099	Uncharacterized protein.	Alpha-1,3-galactosyltransferase 2-like.	0.901
b4galnt1	LOC108939037	ENSSFOP00015022802	ENSSFOP00015006604	Glyco_trans_2-like domain-containing protein.	Beta-1,4 N-acetylgalactosaminyltransferase 1-like.	0.901
gba	Gba2	ENSSFOP00015049649	ENSSFOP00015006982	Glucosylceramidase.	Uncharacterized protein.	0.936