(15 nodes) Endosome to pigment granule transport network (Scleropages formosus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB38	Ras-related protein Rab-38-like. (265 aa)
	Z043_110569	Adaptin_N domain-containing protein. (1182 aa)
	LOC108923034	Ras-related protein Rab-38-like. (222 aa)
	vps18	Vacuolar protein sorting-associated protein 18-like. (978 aa)
	BLOC1S6	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...] (182 aa)
	RAB38-2	Uncharacterized protein. (210 aa)
	LOC108918366	Tetraspanin. (250 aa)
	Bloc1s3	Biogenesis of lysosome-related organelles complex 1 subunit 3-like. (202 aa)
	cd63	Tetraspanin. (239 aa)
	Z043_107906	Ankyrin repeat domain-containing protein 27-like. (922 aa)
	ENSSFOP00015064020	Biogenesis of lysosomal organelles complex-1, subunit 5, muted. (155 aa)
	LOC108934094	Uncharacterized protein. (265 aa)
	LOC108941155	Ankyrin repeat domain-containing protein 27-like. (1081 aa)
	rab32	Uncharacterized protein. (216 aa)
	AP3D1	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (1143 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP3D1	BLOC1S6	ENSSFOP00015018397	ENSSFOP00015027062	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]	0.403
BLOC1S6	AP3D1	ENSSFOP00015027062	ENSSFOP00015018397	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	0.403
BLOC1S6	Bloc1s3	ENSSFOP00015027062	ENSSFOP00015028936	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]	Biogenesis of lysosome-related organelles complex 1 subunit 3-like.	0.942
BLOC1S6	ENSSFOP00015064020	ENSSFOP00015027062	ENSSFOP00015064020	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]	Biogenesis of lysosomal organelles complex-1, subunit 5, muted.	0.865
BLOC1S6	Z043_110569	ENSSFOP00015027062	ENSSFOP00015004198	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]	Adaptin_N domain-containing protein.	0.403
Bloc1s3	BLOC1S6	ENSSFOP00015028936	ENSSFOP00015027062	Biogenesis of lysosome-related organelles complex 1 subunit 3-like.	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]	0.942
Bloc1s3	ENSSFOP00015064020	ENSSFOP00015028936	ENSSFOP00015064020	Biogenesis of lysosome-related organelles complex 1 subunit 3-like.	Biogenesis of lysosomal organelles complex-1, subunit 5, muted.	0.771
ENSSFOP00015064020	BLOC1S6	ENSSFOP00015064020	ENSSFOP00015027062	Biogenesis of lysosomal organelles complex-1, subunit 5, muted.	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]	0.865
ENSSFOP00015064020	Bloc1s3	ENSSFOP00015064020	ENSSFOP00015028936	Biogenesis of lysosomal organelles complex-1, subunit 5, muted.	Biogenesis of lysosome-related organelles complex 1 subunit 3-like.	0.771
LOC108918366	cd63	ENSSFOP00015027803	ENSSFOP00015040925	Tetraspanin.	Tetraspanin.	0.904
LOC108923034	LOC108941155	ENSSFOP00015014353	ENSSFOP00015069527	Ras-related protein Rab-38-like.	Ankyrin repeat domain-containing protein 27-like.	0.559
LOC108923034	Z043_107906	ENSSFOP00015014353	ENSSFOP00015060280	Ras-related protein Rab-38-like.	Ankyrin repeat domain-containing protein 27-like.	0.559
LOC108934094	LOC108941155	ENSSFOP00015068871	ENSSFOP00015069527	Uncharacterized protein.	Ankyrin repeat domain-containing protein 27-like.	0.559
LOC108934094	Z043_107906	ENSSFOP00015068871	ENSSFOP00015060280	Uncharacterized protein.	Ankyrin repeat domain-containing protein 27-like.	0.559
LOC108941155	LOC108923034	ENSSFOP00015069527	ENSSFOP00015014353	Ankyrin repeat domain-containing protein 27-like.	Ras-related protein Rab-38-like.	0.559
LOC108941155	LOC108934094	ENSSFOP00015069527	ENSSFOP00015068871	Ankyrin repeat domain-containing protein 27-like.	Uncharacterized protein.	0.559
LOC108941155	RAB38	ENSSFOP00015069527	ENSSFOP00015018125	Ankyrin repeat domain-containing protein 27-like.	Ras-related protein Rab-38-like.	0.559
LOC108941155	RAB38-2	ENSSFOP00015069527	ENSSFOP00015077519	Ankyrin repeat domain-containing protein 27-like.	Uncharacterized protein.	0.559
LOC108941155	rab32	ENSSFOP00015069527	ENSSFOP00015025894	Ankyrin repeat domain-containing protein 27-like.	Uncharacterized protein.	0.559
RAB38	LOC108941155	ENSSFOP00015018125	ENSSFOP00015069527	Ras-related protein Rab-38-like.	Ankyrin repeat domain-containing protein 27-like.	0.559