(15 nodes) Formation of anatomical boundary network (Scleropages formosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108942527	Mothers against decapentaplegic homolog. (559 aa)
	mafb	Transcription factor MafB-like. (402 aa)
	Z043_120547	Uncharacterized protein. (980 aa)
	LOC108941913	Mothers against decapentaplegic homolog 4-like. (564 aa)
	egr2	Early growth response protein 2b-like. (428 aa)
	LOC108926414	Transcription factor MafB-like. (318 aa)
	rfng	Beta-1,3-N-acetylglucosaminyltransferase radical fringe-like. (406 aa)
	Mib1	Uncharacterized protein. (1038 aa)
	LOC108929719	Receptor protein-tyrosine kinase. (260 aa)
	efnb2	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (337 aa)
	LOC108938388	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (335 aa)
	SMAD4	Mothers against decapentaplegic homolog. (551 aa)
	Z043_107273	Selenoprotein H-like. (130 aa)
	EGR2	Early growth response protein 2b-like. (386 aa)
	med12	Mediator of RNA polymerase II transcription subunit 12-like. (2102 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGR2	egr2	ENSSFOP00015013637	ENSSFOP00015073295	Early growth response protein 2b-like.	Early growth response protein 2b-like.	0.902
LOC108929719	LOC108938388	ENSSFOP00015026241	ENSSFOP00015015466	Receptor protein-tyrosine kinase.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.582
LOC108929719	efnb2	ENSSFOP00015026241	ENSSFOP00015021658	Receptor protein-tyrosine kinase.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.582
LOC108938388	LOC108929719	ENSSFOP00015015466	ENSSFOP00015026241	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Receptor protein-tyrosine kinase.	0.582
LOC108938388	Z043_120547	ENSSFOP00015015466	ENSSFOP00015051150	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.582
Z043_120547	LOC108938388	ENSSFOP00015051150	ENSSFOP00015015466	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.582
Z043_120547	efnb2	ENSSFOP00015051150	ENSSFOP00015021658	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.582
efnb2	LOC108929719	ENSSFOP00015021658	ENSSFOP00015026241	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Receptor protein-tyrosine kinase.	0.582
efnb2	Z043_120547	ENSSFOP00015021658	ENSSFOP00015051150	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.582
egr2	EGR2	ENSSFOP00015073295	ENSSFOP00015013637	Early growth response protein 2b-like.	Early growth response protein 2b-like.	0.902