(31 nodes) Regulation of phagocytosis network (Scleropages formosus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z043_120612	Adiponectin-like. (245 aa)
	LOC108922208	Apolipoprotein A-I-like isoform X2. (255 aa)
	Z043_116593	Apolipoprotein A-I-like. (255 aa)
	appl1	DCC-interacting protein 13-alpha-like. (745 aa)
	ENSSFOP00015033443	annotation not available (255 aa)
	LOC108940319	Interleukin-1 beta-like. (176 aa)
	tmem147	Uncharacterized protein. (225 aa)
	ENSSFOP00015027835	Uncharacterized protein LOC108929677. (309 aa)
	ENSSFOP00015027725	Uncharacterized protein LOC108929673. (300 aa)
	LOC108929669	Uncharacterized protein. (344 aa)
	PTPRC	Receptor-type tyrosine-protein phosphatase C-like. (633 aa)
	PTPRC-2	Receptor-type tyrosine-protein phosphatase C-like. (744 aa)
	ENSSFOP00015027226	annotation not available (336 aa)
	Z043_112389	Sex hormone-binding globulin beta-like. (389 aa)
	Z043_106873	Cystatin fetuin-A-type domain-containing protein. (364 aa)
	LOC108932396	Interleukin-1. (275 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (279 aa)
	ENSSFOP00015037811	Signal-transducing adaptor protein 1-like. (340 aa)
	ENSSFOP00015037357	Interleukin-2 receptor subunit beta-like. (515 aa)
	letmd1	LETM1 domain-containing protein 1-like. (361 aa)
	LYAR	Cell growth-regulating nucleolar protein-like. (404 aa)
	ptx3	Pentraxin-related protein PTX3. (437 aa)
	apoa1	28kDa-2 apolipoprotein-like. (254 aa)
	ENSSFOP00015053091	annotation not available (264 aa)
	ENSSFOP00015050619	Growth arrest-specific 6. (717 aa)
	Z043_116999	Adiponectin-like. (301 aa)
	Syt7	Synaptotagmin-7-like. (480 aa)
	LOC108940834	Cytochrome b-245 light chain-like. (187 aa)
	ano6	Anoctamin. (924 aa)
	appl2	Uncharacterized protein. (665 aa)
	Z043_118271	Prolactin-like. (262 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFOP00015033443	Z043_106873	ENSSFOP00015033443	ENSSFOP00015023134	annotation not available	Cystatin fetuin-A-type domain-containing protein.	0.620
ENSSFOP00015037357	PTPRC	ENSSFOP00015037357	ENSSFOP00015005552	Interleukin-2 receptor subunit beta-like.	Receptor-type tyrosine-protein phosphatase C-like.	0.428
ENSSFOP00015037357	PTPRC-2	ENSSFOP00015037357	ENSSFOP00015005610	Interleukin-2 receptor subunit beta-like.	Receptor-type tyrosine-protein phosphatase C-like.	0.428
LOC108922208	Z043_106873	ENSSFOP00015033464	ENSSFOP00015023134	Apolipoprotein A-I-like isoform X2.	Cystatin fetuin-A-type domain-containing protein.	0.620
LOC108932396	LOC108940319	ENSSFOP00015018313	ENSSFOP00015029662	Interleukin-1.	Interleukin-1 beta-like.	0.903
LOC108940319	LOC108932396	ENSSFOP00015029662	ENSSFOP00015018313	Interleukin-1 beta-like.	Interleukin-1.	0.903
PTPRC	ENSSFOP00015037357	ENSSFOP00015005552	ENSSFOP00015037357	Receptor-type tyrosine-protein phosphatase C-like.	Interleukin-2 receptor subunit beta-like.	0.428
PTPRC	PTPRC-2	ENSSFOP00015005552	ENSSFOP00015005610	Receptor-type tyrosine-protein phosphatase C-like.	Receptor-type tyrosine-protein phosphatase C-like.	0.900
PTPRC-2	ENSSFOP00015037357	ENSSFOP00015005610	ENSSFOP00015037357	Receptor-type tyrosine-protein phosphatase C-like.	Interleukin-2 receptor subunit beta-like.	0.428
PTPRC-2	PTPRC	ENSSFOP00015005610	ENSSFOP00015005552	Receptor-type tyrosine-protein phosphatase C-like.	Receptor-type tyrosine-protein phosphatase C-like.	0.900
Z043_106873	ENSSFOP00015033443	ENSSFOP00015023134	ENSSFOP00015033443	Cystatin fetuin-A-type domain-containing protein.	annotation not available	0.620
Z043_106873	LOC108922208	ENSSFOP00015023134	ENSSFOP00015033464	Cystatin fetuin-A-type domain-containing protein.	Apolipoprotein A-I-like isoform X2.	0.620
Z043_106873	Z043_116593	ENSSFOP00015023134	ENSSFOP00015033450	Cystatin fetuin-A-type domain-containing protein.	Apolipoprotein A-I-like.	0.620
Z043_116593	Z043_106873	ENSSFOP00015033450	ENSSFOP00015023134	Apolipoprotein A-I-like.	Cystatin fetuin-A-type domain-containing protein.	0.620
Z043_116999	Z043_120612	ENSSFOP00015016568	ENSSFOP00015049917	Adiponectin-like.	Adiponectin-like.	0.901
Z043_116999	appl1	ENSSFOP00015016568	ENSSFOP00015002881	Adiponectin-like.	DCC-interacting protein 13-alpha-like.	0.574
Z043_116999	appl2	ENSSFOP00015016568	ENSSFOP00015009110	Adiponectin-like.	Uncharacterized protein.	0.574
Z043_120612	Z043_116999	ENSSFOP00015049917	ENSSFOP00015016568	Adiponectin-like.	Adiponectin-like.	0.901
Z043_120612	appl1	ENSSFOP00015049917	ENSSFOP00015002881	Adiponectin-like.	DCC-interacting protein 13-alpha-like.	0.574
Z043_120612	appl2	ENSSFOP00015049917	ENSSFOP00015009110	Adiponectin-like.	Uncharacterized protein.	0.574