(22 nodes) Definitive hemopoiesis network (Scleropages formosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ddx46	Putative ATP-dependent RNA helicase DDX46. (1052 aa)
	SP3	Transcription factor Sp3-like. (693 aa)
	ENSSFOP00015028077	annotation not available (317 aa)
	CBFB	Uncharacterized protein. (285 aa)
	kri1	Protein KRI1-like. (768 aa)
	LOC108928831	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	Sumo2	Small ubiquitin-related modifier. (103 aa)
	sae1	SUMO-activating enzyme subunit 1-like. (361 aa)
	cdk5rap3	CDK5 regulatory subunit-associated protein 3-like. (515 aa)
	LOC108920613	Small ubiquitin-related modifier 1 isoform X1. (157 aa)
	LOC108935074	T-cell acute lymphocytic leukemia protein 1-like. (342 aa)
	LOC108933953	Uncharacterized protein. (206 aa)
	LOC108924813	Uncharacterized protein. (130 aa)
	Z043_111260	Small ubiquitin-related modifier 2-like. (112 aa)
	LOC108939887	BHLH domain-containing protein. (396 aa)
	SP3-2	Transcription factor Sp3-like. (741 aa)
	LOC108942489	Small ubiquitin-related modifier. (94 aa)
	sumo1	Small ubiquitin-related modifier 1-like. (101 aa)
	ube2i	SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
	gar1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (196 aa)
	adar	Double-stranded RNA-specific adenosine deaminase-like. (1410 aa)
	Mib1	Uncharacterized protein. (1038 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBFB	LOC108935074	ENSSFOP00015021449	ENSSFOP00015067202	Uncharacterized protein.	T-cell acute lymphocytic leukemia protein 1-like.	0.699
CBFB	LOC108939887	ENSSFOP00015021449	ENSSFOP00015056400	Uncharacterized protein.	BHLH domain-containing protein.	0.601
LOC108920613	LOC108928831	ENSSFOP00015078934	ENSSFOP00015012881	Small ubiquitin-related modifier 1 isoform X1.	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	0.993
LOC108920613	LOC108942489	ENSSFOP00015078934	ENSSFOP00015054683	Small ubiquitin-related modifier 1 isoform X1.	Small ubiquitin-related modifier.	0.671
LOC108920613	SP3	ENSSFOP00015078934	ENSSFOP00015028867	Small ubiquitin-related modifier 1 isoform X1.	Transcription factor Sp3-like.	0.413
LOC108920613	SP3-2	ENSSFOP00015078934	ENSSFOP00015055900	Small ubiquitin-related modifier 1 isoform X1.	Transcription factor Sp3-like.	0.413
LOC108920613	Sumo2	ENSSFOP00015078934	ENSSFOP00015011294	Small ubiquitin-related modifier 1 isoform X1.	Small ubiquitin-related modifier.	0.678
LOC108920613	Z043_111260	ENSSFOP00015078934	ENSSFOP00015057944	Small ubiquitin-related modifier 1 isoform X1.	Small ubiquitin-related modifier 2-like.	0.680
LOC108920613	sae1	ENSSFOP00015078934	ENSSFOP00015009824	Small ubiquitin-related modifier 1 isoform X1.	SUMO-activating enzyme subunit 1-like.	0.970
LOC108920613	ube2i	ENSSFOP00015078934	ENSSFOP00015049526	Small ubiquitin-related modifier 1 isoform X1.	SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	0.993
LOC108928831	LOC108920613	ENSSFOP00015012881	ENSSFOP00015078934	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier 1 isoform X1.	0.993
LOC108928831	LOC108942489	ENSSFOP00015012881	ENSSFOP00015054683	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier.	0.988
LOC108928831	Sumo2	ENSSFOP00015012881	ENSSFOP00015011294	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier.	0.988
LOC108928831	Z043_111260	ENSSFOP00015012881	ENSSFOP00015057944	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier 2-like.	0.885
LOC108928831	sae1	ENSSFOP00015012881	ENSSFOP00015009824	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	SUMO-activating enzyme subunit 1-like.	0.951
LOC108928831	sumo1	ENSSFOP00015012881	ENSSFOP00015052546	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier 1-like.	0.993
LOC108928831	ube2i	ENSSFOP00015012881	ENSSFOP00015049526	SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.	0.900
LOC108933953	LOC108935074	ENSSFOP00015060358	ENSSFOP00015067202	Uncharacterized protein.	T-cell acute lymphocytic leukemia protein 1-like.	0.699
LOC108933953	LOC108939887	ENSSFOP00015060358	ENSSFOP00015056400	Uncharacterized protein.	BHLH domain-containing protein.	0.601
LOC108935074	CBFB	ENSSFOP00015067202	ENSSFOP00015021449	T-cell acute lymphocytic leukemia protein 1-like.	Uncharacterized protein.	0.699