STRINGSTRING
ENSSFOP00015005678 ENSSFOP00015005678 polr2g polr2g polr2k polr2k cdk7 cdk7 gtf2f2 gtf2f2 supt5h supt5h ercc2 ercc2 Gtf2h2c Gtf2h2c LOC108940655 LOC108940655 gtf2h1 gtf2h1 nelfcd nelfcd mnat1 mnat1 Nelfb Nelfb polr2h polr2h LOC108921603 LOC108921603 gtf2h4 gtf2h4 gtf2h5 gtf2h5 ccnh ccnh nelfe nelfe polr2e polr2e ctdp1 ctdp1 polr2l polr2l polr2j polr2j polr2c polr2c NCBP1 NCBP1 gtf2h3 gtf2h3 supt4h1 supt4h1 polr2f polr2f nelfa nelfa ercc3 ercc3 Polr2b Polr2b polr2d polr2d Z043_124132 Z043_124132 polr2a polr2a polr2i polr2i
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSFOP00015005678annotation not available (88 aa)
polr2gDNA-directed RNA polymerase II subunit RPB7-like. (180 aa)
polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4-like. (58 aa)
cdk7Cyclin-dependent kinase 7-like. (353 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (263 aa)
supt5hTranscription elongation factor SPT5-like. (1084 aa)
ercc2TFIIH basal transcription factor complex helicase XPD subunit-like. (760 aa)
Gtf2h2cC2H2-type domain-containing protein. (398 aa)
LOC108940655Uncharacterized protein. (408 aa)
gtf2h1General transcription factor IIH subunit 1-like. (548 aa)
nelfcdNegative elongation factor D-like. (605 aa)
mnat1CDK-activating kinase assembly factor MAT1-like. (310 aa)
NelfbUncharacterized protein. (591 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC108921603Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
gtf2h5TFIIH basal transcription factor complex TTD-A subunit. (71 aa)
ccnhCYCLIN domain-containing protein; Belongs to the cyclin family. (337 aa)
nelfeRRM domain-containing protein. (369 aa)
polr2eDNA-directed RNA polymerases i II and III subunit rpabc1-like. (233 aa)
ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (987 aa)
polr2lUncharacterized protein. (67 aa)
polr2jDNA-directed RNA polymerase II subunit RPB11-a. (130 aa)
polr2cDNA-directed RNA polymerase II subunit RPB3-like. (275 aa)
NCBP1Nuclear cap-binding protein subunit 1-like. (843 aa)
gtf2h3General transcription factor IIH subunit 3-like. (301 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2-like. (127 aa)
nelfaHDAg domain-containing protein. (547 aa)
ercc3TFIIH basal transcription factor complex helicase XPB subunit-like. (810 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
polr2dDNA-directed RNA polymerase II subunit RPB4-like. (144 aa)
Z043_124132Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (510 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1968 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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