STRINGSTRING
polr2g polr2g isy1 isy1 tceanc tceanc Z043_107472 Z043_107472 polr2h polr2h EP300 EP300 gtf2h4 gtf2h4 gtf2h5 gtf2h5 ppp1r42 ppp1r42 ccnh ccnh LOC108942065 LOC108942065 Rps27a Rps27a gtf2h3 gtf2h3 uvssa uvssa cops3 cops3 uba52 uba52 Tceanc2 Tceanc2 cops7a cops7a COPS2 COPS2 mnat1 mnat1 nrde2 nrde2 LOC108926053 LOC108926053 ddb1 ddb1 gtf2h1 gtf2h1 Gtf2h2c Gtf2h2c COPS6 COPS6 ZNF830 ZNF830 LOC108935875 LOC108935875 polr2i polr2i tcea1 tcea1 polr2a polr2a ercc2 ercc2 cdk7 cdk7 cops4 cops4 polr2d polr2d Polr2b Polr2b ercc3 ercc3 LOC108925657 LOC108925657 xab2 xab2 COPS5 COPS5 polr2f polr2f CUL4B CUL4B ppie ppie ercc8 ercc8 LOC114910717 LOC114910717 CUL4B-2 CUL4B-2 polr2c polr2c kxd1 kxd1 polr2j polr2j polr2l polr2l LOC108939936 LOC108939936 rbx1 rbx1 gps1 gps1 Cul4a Cul4a prpf19 prpf19 aqr aqr ercc6 ercc6 polr2e polr2e Cops8 Cops8 LOC108927661 LOC108927661 Usp7 Usp7 ENSSFOP00015007539 ENSSFOP00015007539 xpa xpa ENSSFOP00015005678 ENSSFOP00015005678 polr2k polr2k
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2gDNA-directed RNA polymerase II subunit RPB7-like. (180 aa)
isy1Pre-mRNA-splicing factor ISY1-like. (286 aa)
tceancTranscription elongation factor A N-terminal and central domain-containing protein-like. (638 aa)
Z043_107472Rbx1 protein-like. (105 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
EP300E1A binding protein p300. (2377 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
gtf2h5TFIIH basal transcription factor complex TTD-A subunit. (71 aa)
ppp1r42Protein phosphatase 1 regulatory subunit 42-like. (336 aa)
ccnhCYCLIN domain-containing protein; Belongs to the cyclin family. (337 aa)
LOC108942065COP9 signalosome complex subunit 2-like. (443 aa)
Rps27aUbiquitin and ribosomal protein S27a-like protein-like. (177 aa)
gtf2h3General transcription factor IIH subunit 3-like. (301 aa)
uvssaUncharacterized protein. (713 aa)
cops3COP9 signalosome complex subunit 3-like. (423 aa)
uba52Ubiquitin-large subunit ribosomal protein L40e. (128 aa)
Tceanc2Transcription elongation factor A N-terminal and central domain-containing protein 2-like. (282 aa)
cops7aCOP9 signalosome complex subunit 7a-like. (268 aa)
COPS2COP9 signalosome complex subunit 2-like. (443 aa)
mnat1CDK-activating kinase assembly factor MAT1-like. (310 aa)
nrde2Thyroglobulin type-1 domain-containing protein. (1143 aa)
LOC108926053Uncharacterized protein. (2686 aa)
ddb1DNA damage-binding protein 1-like. (1138 aa)
gtf2h1General transcription factor IIH subunit 1-like. (548 aa)
Gtf2h2cC2H2-type domain-containing protein. (398 aa)
COPS6COP9 signalosome complex subunit 6-like. (359 aa)
ZNF830Uncharacterized protein. (355 aa)
LOC108935875Transcription elongation factor A protein 3-like isoform X1. (525 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
tcea1Uncharacterized protein. (318 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1968 aa)
ercc2TFIIH basal transcription factor complex helicase XPD subunit-like. (760 aa)
cdk7Cyclin-dependent kinase 7-like. (353 aa)
cops4COP9 signalosome complex subunit 4-like. (421 aa)
polr2dDNA-directed RNA polymerase II subunit RPB4-like. (144 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
ercc3TFIIH basal transcription factor complex helicase XPB subunit-like. (810 aa)
LOC108925657Transcription elongation factor A protein 2-like. (322 aa)
xab2Pre-mRNA-splicing factor SYF1-like. (856 aa)
COPS5COP9 signalosome complex subunit 5-like. (346 aa)
polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2-like. (127 aa)
CUL4BCULLIN_2 domain-containing protein; Belongs to the cullin family. (991 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (343 aa)
ercc8DNA excision repair protein ERCC-8-like. (400 aa)
LOC114910717Polyubiquitin-C. (381 aa)
CUL4B-2Cullin-4B-like; Belongs to the cullin family. (903 aa)
polr2cDNA-directed RNA polymerase II subunit RPB3-like. (275 aa)
kxd1KxDL motif-containing protein 1-like. (176 aa)
polr2jDNA-directed RNA polymerase II subunit RPB11-a. (130 aa)
polr2lUncharacterized protein. (67 aa)
LOC108939936E3 ubiquitin-protein ligase RBX1-like. (108 aa)
rbx1Ring-box 1. (112 aa)
gps1COP9 signalosome complex subunit 1-like. (525 aa)
Cul4aCullin-4A-like; Belongs to the cullin family. (771 aa)
prpf19Uncharacterized protein. (505 aa)
aqrIntron-binding protein aquarius-like. (1463 aa)
ercc6DNA excision repair protein ERCC-6-like. (1432 aa)
polr2eDNA-directed RNA polymerases i II and III subunit rpabc1-like. (233 aa)
Cops8E3 ubiquitin-protein ligase TRIM63-like. (201 aa)
LOC108927661COP9 signalosome complex subunit 5-like. (365 aa)
Usp7Ubiquitin carboxyl-terminal hydrolase 7-like; Belongs to the peptidase C19 family. (1110 aa)
ENSSFOP00015007539COP9 signalosome complex subunit 7b-like. (248 aa)
xpaDNA repair protein complementing XP-A cells-like. (271 aa)
ENSSFOP00015005678annotation not available (88 aa)
polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4-like. (58 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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