STRINGSTRING
ENSSFOP00015060463 ENSSFOP00015060463 Usp7 Usp7 polr2e polr2e ercc6 ercc6 aqr aqr prpf19 prpf19 Cul4a Cul4a rpa3 rpa3 rbx1 rbx1 LOC108939936 LOC108939936 ercc4 ercc4 bivm bivm polr2l polr2l Rcbtb2 Rcbtb2 polk polk LOC108933199 LOC108933199 polr2j polr2j kxd1 kxd1 pole2 pole2 polr2c polr2c CUL4B-2 CUL4B-2 pole4 pole4 Pold4 Pold4 LOC114910717 LOC114910717 pole pole ercc8 ercc8 ppie ppie CUL4B CUL4B rfc4 rfc4 polr2f polr2f rfc5 rfc5 xab2 xab2 LOC108925657 LOC108925657 ercc3 ercc3 Polr2b Polr2b polr2d polr2d polr2a polr2a tcea1 tcea1 polr2i polr2i LOC108935875 LOC108935875 Tceanc2 Tceanc2 Meiob Meiob uba52 uba52 PCNA PCNA pold2 pold2 uvssa uvssa LOC108930563 LOC108930563 gtf2h3 gtf2h3 Rps27a Rps27a ccnh ccnh gtf2h5 gtf2h5 gtf2h4 gtf2h4 EP300 EP300 polr2h polr2h pole3 pole3 Z043_107472 Z043_107472 mnat1 mnat1 LOC108933423 LOC108933423 phf3 phf3 rfc1 rfc1 nrde2 nrde2 LOC108926053 LOC108926053 ddb1 ddb1 gtf2h1 gtf2h1 ercc1 ercc1 LOC108920419 LOC108920419 Gtf2h2c Gtf2h2c pold1 pold1 rfc2 rfc2 pold3 pold3 ercc5 ercc5 ZNF830 ZNF830 usp40 usp40 ercc2 ercc2 rpa2 rpa2 cdk7 cdk7 Z043_106750 Z043_106750 rfc3 rfc3 xpa xpa ENSSFOP00015005678 ENSSFOP00015005678 polr2k polr2k polr2g polr2g isy1 isy1 tceanc tceanc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSFOP00015060463annotation not available (874 aa)
Usp7Ubiquitin carboxyl-terminal hydrolase 7-like; Belongs to the peptidase C19 family. (1110 aa)
polr2eDNA-directed RNA polymerases i II and III subunit rpabc1-like. (233 aa)
ercc6DNA excision repair protein ERCC-6-like. (1432 aa)
aqrIntron-binding protein aquarius-like. (1463 aa)
prpf19Uncharacterized protein. (505 aa)
Cul4aCullin-4A-like; Belongs to the cullin family. (771 aa)
rpa3Replication protein A3, 14kDa-like. (122 aa)
rbx1Ring-box 1. (112 aa)
LOC108939936E3 ubiquitin-protein ligase RBX1-like. (108 aa)
ercc4DNA repair endonuclease XPF-like. (909 aa)
bivmBasic immunoglobulin-like variable motif-containing protein. (555 aa)
polr2lUncharacterized protein. (67 aa)
Rcbtb2RCC1 and BTB domain-containing protein 2-like. (624 aa)
polkDNA polymerase kappa-like. (890 aa)
LOC108933199RCC1 and BTB domain-containing protein 1-like. (550 aa)
polr2jDNA-directed RNA polymerase II subunit RPB11-a. (130 aa)
kxd1KxDL motif-containing protein 1-like. (176 aa)
pole2DNA polymerase epsilon subunit 2-like. (560 aa)
polr2cDNA-directed RNA polymerase II subunit RPB3-like. (275 aa)
CUL4B-2Cullin-4B-like; Belongs to the cullin family. (903 aa)
pole4CBFD_NFYB_HMF domain-containing protein. (191 aa)
Pold4DNA polymerase delta subunit 4-like. (124 aa)
LOC114910717Polyubiquitin-C. (381 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2291 aa)
ercc8DNA excision repair protein ERCC-8-like. (400 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (343 aa)
CUL4BCULLIN_2 domain-containing protein; Belongs to the cullin family. (991 aa)
rfc4Replication factor C subunit 4-like. (365 aa)
polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2-like. (127 aa)
rfc5AAA domain-containing protein. (337 aa)
xab2Pre-mRNA-splicing factor SYF1-like. (856 aa)
LOC108925657Transcription elongation factor A protein 2-like. (322 aa)
ercc3TFIIH basal transcription factor complex helicase XPB subunit-like. (810 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
polr2dDNA-directed RNA polymerase II subunit RPB4-like. (144 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1968 aa)
tcea1Uncharacterized protein. (318 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC108935875Transcription elongation factor A protein 3-like isoform X1. (525 aa)
Tceanc2Transcription elongation factor A N-terminal and central domain-containing protein 2-like. (282 aa)
MeiobUncharacterized protein. (423 aa)
uba52Ubiquitin-large subunit ribosomal protein L40e. (128 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
pold2Pold2 protein-like. (501 aa)
uvssaUncharacterized protein. (713 aa)
LOC108930563C-C motif chemokine 20-like. (115 aa)
gtf2h3General transcription factor IIH subunit 3-like. (301 aa)
Rps27aUbiquitin and ribosomal protein S27a-like protein-like. (177 aa)
ccnhCYCLIN domain-containing protein; Belongs to the cyclin family. (337 aa)
gtf2h5TFIIH basal transcription factor complex TTD-A subunit. (71 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
EP300E1A binding protein p300. (2377 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
pole3DNA polymerase epsilon subunit 3-like. (144 aa)
Z043_107472Rbx1 protein-like. (105 aa)
mnat1CDK-activating kinase assembly factor MAT1-like. (310 aa)
LOC108933423Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
phf3PHD finger protein 3-like. (1788 aa)
rfc1Replication factor C subunit 1. (1157 aa)
nrde2Thyroglobulin type-1 domain-containing protein. (1143 aa)
LOC108926053Uncharacterized protein. (2686 aa)
ddb1DNA damage-binding protein 1-like. (1138 aa)
gtf2h1General transcription factor IIH subunit 1-like. (548 aa)
ercc1DNA excision repair protein ERCC-1-like. (335 aa)
LOC108920419RCC1 and BTB domain-containing protein 1-like. (531 aa)
Gtf2h2cC2H2-type domain-containing protein. (398 aa)
pold1DNA polymerase. (1105 aa)
rfc2Replication factor C subunit 2-like. (370 aa)
pold3DNA polymerase delta subunit 3-like. (464 aa)
ercc5DNA repair protein complementing XP-G cells-like. (1077 aa)
ZNF830Uncharacterized protein. (355 aa)
usp40Ubiquitin carboxyl-terminal hydrolase 40-like; Belongs to the peptidase C19 family. (1253 aa)
ercc2TFIIH basal transcription factor complex helicase XPD subunit-like. (760 aa)
rpa2Replication protein A 32 kDa subunit-like. (273 aa)
cdk7Cyclin-dependent kinase 7-like. (353 aa)
Z043_106750Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (645 aa)
rfc3Replication factor C (Activator 1) 3-like. (356 aa)
xpaDNA repair protein complementing XP-A cells-like. (271 aa)
ENSSFOP00015005678annotation not available (88 aa)
polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4-like. (58 aa)
polr2gDNA-directed RNA polymerase II subunit RPB7-like. (180 aa)
isy1Pre-mRNA-splicing factor ISY1-like. (286 aa)
tceancTranscription elongation factor A N-terminal and central domain-containing protein-like. (638 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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