STRINGSTRING
polr2j polr2j LOC108939332 LOC108939332 ptbp1 ptbp1 polr2l polr2l esrp2 esrp2 Hnrnpm Hnrnpm esrp1 esrp1 gtf2f2 gtf2f2 polr2k polr2k polr2g polr2g LOC108935247 LOC108935247 polr2e polr2e LOC108929959 LOC108929959 ptbp2 ptbp2 NCBP1 NCBP1 polr2f polr2f tial1 tial1 Polr2b Polr2b polr2d polr2d Z043_124132 Z043_124132 polr2a polr2a polr2i polr2i LOC108940343 LOC108940343 LOC108918505 LOC108918505 LOC108921603 LOC108921603 polr2h polr2h polr2c polr2c
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2jDNA-directed RNA polymerase II subunit RPB11-a. (130 aa)
LOC108939332Uncharacterized protein. (360 aa)
ptbp1Polypyrimidine tract-binding protein 1-like. (578 aa)
polr2lUncharacterized protein. (67 aa)
esrp2Epithelial splicing regulatory protein 2-like. (734 aa)
HnrnpmHeterogeneous nuclear ribonucleoprotein M-like. (649 aa)
esrp1Epithelial splicing regulatory protein 1-like. (721 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (263 aa)
polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4-like. (58 aa)
polr2gDNA-directed RNA polymerase II subunit RPB7-like. (180 aa)
LOC108935247Polypyrimidine tract-binding protein 2-like. (592 aa)
polr2eDNA-directed RNA polymerases i II and III subunit rpabc1-like. (233 aa)
LOC108929959Nucleolysin TIA-1-like. (428 aa)
ptbp2Polypyrimidine tract-binding protein 2-like. (522 aa)
NCBP1Nuclear cap-binding protein subunit 1-like. (843 aa)
polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2-like. (127 aa)
tial1Nucleolysin TIAR-like. (408 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
polr2dDNA-directed RNA polymerase II subunit RPB4-like. (144 aa)
Z043_124132Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (510 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1968 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC108940343Nucleolysin TIA-1-like. (389 aa)
LOC108918505Uncharacterized protein. (340 aa)
LOC108921603Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
polr2cDNA-directed RNA polymerase II subunit RPB3-like. (275 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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