STRINGSTRING
LOC108928088 LOC108928088 tbp tbp ints9 ints9 NCBP1 NCBP1 supt4h1 supt4h1 ints3 ints3 ENSSFOP00015044635 ENSSFOP00015044635 Z043_111845 Z043_111845 ZNF143 ZNF143 LOC108935885 LOC108935885 polr2f polr2f LOC108918651 LOC108918651 Z043_108599 Z043_108599 Polr2b Polr2b polr2d polr2d ints10 ints10 Z043_124132 Z043_124132 polr2a polr2a TAF6 TAF6 Z043_114188 Z043_114188 polr2i polr2i LOC108922259 LOC108922259 rprd2 rprd2 LOC108933805 LOC108933805 ICE2 ICE2 CCDC66 CCDC66 ENSSFOP00015032353 ENSSFOP00015032353 Z043_108181 Z043_108181 CCNT2 CCNT2 rprd1b rprd1b ell3 ell3 LOC108936341 LOC108936341 Z043_121963 Z043_121963 ENSSFOP00015029249 ENSSFOP00015029249 snapc3 snapc3 spag16 spag16 nabp2 nabp2 Z043_103307 Z043_103307 INTS12 INTS12 fndc10 fndc10 ssu72 ssu72 Pou6f2 Pou6f2 LOC108921603 LOC108921603 ints1 ints1 cdk9 cdk9 Ints2 Ints2 polr2h polr2h LOC108939012 LOC108939012 Taf8 Taf8 snapc1 snapc1 LOC108928975 LOC108928975 GTF2A1 GTF2A1 ints13 ints13 rprd1a rprd1a ccnq ccnq sp1 sp1 snapc2 snapc2 ints8 ints8 gtf2e1 gtf2e1 LOC108920015 LOC108920015 LOC108936108 LOC108936108 LOC108931415 LOC108931415 phax phax POU2F1-2 POU2F1-2 taf13 taf13 tmtc4 tmtc4 nabp1 nabp1 Ints7 Ints7 Z043_121743 Z043_121743 zc3h4 zc3h4 ints5 ints5 supt5h supt5h gtf2f2 gtf2f2 cdk7 cdk7 pcf11 pcf11 Zc3h6 Zc3h6 taf11 taf11 ENSSFOP00015005678 ENSSFOP00015005678 ice1 ice1 ell ell CCNK CCNK polr2k polr2k ints4 ints4 polr2g polr2g gtf2e2 gtf2e2 POU2F1 POU2F1 Z043_103597 Z043_103597 polr2e polr2e tbpl1 tbpl1 POU2F3 POU2F3 gtf2b gtf2b Pou6f1 Pou6f1 Z043_113935 Z043_113935 Z043_121382 Z043_121382 ints14 ints14 CCNT2-2 CCNT2-2 polr2l polr2l gtf2a2 gtf2a2 ints11 ints11 polr2j polr2j Z043_100306 Z043_100306 Z043_123412 Z043_123412 TMEM240 TMEM240 taf5 taf5 polr2c polr2c LOC108921416 LOC108921416 ENSSFOP00015052555 ENSSFOP00015052555 LOC108928197 LOC108928197 taf5l taf5l LOC108922824 LOC108922824 tmtc3 tmtc3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108928088Transmembrane protein 240-like. (175 aa)
tbpTATA-box-binding protein-like. (316 aa)
ints9Integrator complex subunit 9-like. (660 aa)
NCBP1Nuclear cap-binding protein subunit 1-like. (843 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
ints3Integrator complex subunit 3-like. (1064 aa)
ENSSFOP00015044635annotation not available (79 aa)
Z043_111845Integrator complex subunit 6-like. (893 aa)
ZNF143Zinc finger protein 143-like. (646 aa)
LOC108935885Transmembrane and TPR repeat-containing protein 2-like. (833 aa)
polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2-like. (127 aa)
LOC108918651Transcription initiation factor TFIID subunit 6-like. (668 aa)
Z043_108599POU domain protein. (518 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
polr2dDNA-directed RNA polymerase II subunit RPB4-like. (144 aa)
ints10Integrator complex subunit 10-like. (772 aa)
Z043_124132Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (510 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1968 aa)
TAF6Transcription initiation factor TFIID subunit 6-like. (689 aa)
Z043_114188POU domain protein. (369 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC108922259General transcription factor IIA, 1, 19/37kDa-like. (367 aa)
rprd2CID domain-containing protein. (1331 aa)
LOC108933805Zinc finger protein 76. (571 aa)
ICE2NMDA receptor-regulated protein 2-like. (945 aa)
CCDC66CCDC66 domain-containing protein. (713 aa)
ENSSFOP00015032353Cyclin T1. (239 aa)
Z043_108181Putative RNA polymerase II subunit B1 CTD phosphatase rpap2. (599 aa)
CCNT2Cyclin-T2-like; Belongs to the cyclin family. (697 aa)
rprd1bRegulation of nuclear pre-mRNA domain-containing protein 1B. (335 aa)
ell3RNA polymerase II elongation factor ELL2-like. (601 aa)
LOC108936341Transmembrane and TPR repeat-containing protein 2-like. (835 aa)
Z043_121963CID domain-containing protein. (714 aa)
ENSSFOP00015029249Integrator complex subunit 12. (446 aa)
snapc3snRNA-activating protein complex subunit 3-like. (387 aa)
spag16Sperm-associated antigen 16 protein-like. (642 aa)
nabp2SOSS complex subunit B1-B-like. (197 aa)
Z043_103307Serrate RNA effector molecule-like. (873 aa)
INTS12Integrator complex subunit 12-like. (447 aa)
fndc10Fibronectin type III domain-containing protein 10. (390 aa)
ssu72RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like. (194 aa)
Pou6f2POU domain protein. (669 aa)
LOC108921603Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
ints1Integrator complex subunit 1-like. (2189 aa)
cdk9Cyclin-dependent kinase 9-like; Belongs to the protein kinase superfamily. (393 aa)
Ints2Integrator complex subunit 2-like. (1207 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC108939012Zinc finger protein 143-like isoform X1. (637 aa)
Taf8Transcription initiation factor TFIID subunit 8-like. (310 aa)
snapc1snRNA-activating protein complex subunit 1-like. (356 aa)
LOC108928975Integrator complex subunit 6-like. (907 aa)
GTF2A1Transcription initiation factor IIA subunit 1-like isoform X1. (359 aa)
ints13Protein asunder-like. (707 aa)
rprd1aRegulation of nuclear pre-mRNA domain-containing protein 1A-like. (312 aa)
ccnqCyclin-related protein FAM58A-like; Belongs to the cyclin family. (247 aa)
sp1Transcription factor Sp1-like. (709 aa)
snapc2SnRNA-activating protein complex subunit 2 isoform X1. (553 aa)
ints8Uncharacterized protein. (999 aa)
gtf2e1General transcription factor IIE subunit 1-like. (449 aa)
LOC108920015Transcription initiation factor TFIID subunit 9-like. (253 aa)
LOC108936108POU domain protein. (387 aa)
LOC108931415TPR_REGION domain-containing protein. (837 aa)
phaxPhosphorylated adapter RNA export protein-like. (399 aa)
POU2F1-2POU domain protein. (723 aa)
taf13Transcription initiation factor TFIID subunit 13-like. (124 aa)
tmtc4Transmembrane and TPR repeat-containing protein 4-like. (774 aa)
nabp1SOSS complex subunit B2-like. (214 aa)
Ints7Integrator complex subunit 7-like. (967 aa)
Z043_121743Transmembrane and TPR repeat-containing protein 2-like. (827 aa)
zc3h4Zinc finger CCCH domain-containing protein 4-like. (1343 aa)
ints5Integrator complex subunit 5-like. (1019 aa)
supt5hTranscription elongation factor SPT5-like. (1084 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (263 aa)
cdk7Cyclin-dependent kinase 7-like. (353 aa)
pcf11Pre-mRNA cleavage complex 2 protein Pcf11-like. (1560 aa)
Zc3h6Zinc finger CCCH domain-containing protein 6-like. (1146 aa)
taf11Transcription initiation factor TFIID subunit 11-like. (205 aa)
ENSSFOP00015005678annotation not available (88 aa)
ice1Little elongation complex subunit 1 isoform X1. (1803 aa)
ellUncharacterized protein. (632 aa)
CCNKCyclin-K-like; Belongs to the cyclin family. (555 aa)
polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4-like. (58 aa)
ints4Integrator complex subunit 4-like. (972 aa)
polr2gDNA-directed RNA polymerase II subunit RPB7-like. (180 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (290 aa)
POU2F1POU domain protein. (664 aa)
Z043_103597Uncharacterized protein. (196 aa)
polr2eDNA-directed RNA polymerases i II and III subunit rpabc1-like. (233 aa)
tbpl1TATA box-binding protein-like protein 1-like. (194 aa)
POU2F3POU domain protein. (425 aa)
gtf2bTranscription initiation factor IIB-like. (319 aa)
Pou6f1POU domain, class 6, transcription factor 1-like. (631 aa)
Z043_113935Cyclin-T1-like; Belongs to the cyclin family. (499 aa)
Z043_121382POU domain protein. (704 aa)
ints14Von Willebrand factor A domain-containing protein 9-like. (524 aa)
CCNT2-2Cyclin-T2-like. (643 aa)
polr2lUncharacterized protein. (67 aa)
gtf2a2Transcription initiation factor IIA subunit 2-like. (109 aa)
ints11Integrator complex subunit 11-like. (618 aa)
polr2jDNA-directed RNA polymerase II subunit RPB11-a. (130 aa)
Z043_100306TPR_REGION domain-containing protein. (911 aa)
Z043_123412Uncharacterized protein. (286 aa)
TMEM240Transmembrane protein 240-like. (175 aa)
taf5Transcription initiation factor TFIID subunit 5-like. (764 aa)
polr2cDNA-directed RNA polymerase II subunit RPB3-like. (275 aa)
LOC108921416RNA polymerase II elongation factor ELL-like. (562 aa)
ENSSFOP00015052555annotation not available (962 aa)
LOC108928197RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like. (194 aa)
taf5lTAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L-like. (594 aa)
LOC108922824Integrator complex subunit 6-like. (897 aa)
tmtc3Transmembrane and TPR repeat-containing protein 3-like. (916 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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