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ercc3 ercc3 polr2d polr2d Z043_105766 Z043_105766 Z043_124132 Z043_124132 Z043_102220 Z043_102220 polr2a polr2a TAF6 TAF6 polr2i polr2i LOC108922259 LOC108922259 gtf2h3 gtf2h3 spag16 spag16 ccnh ccnh gtf2h5 gtf2h5 gtf2h4 gtf2h4 polr2h polr2h mnat1 mnat1 GTF2A1 GTF2A1 gtf2h1 gtf2h1 TAF4B TAF4B gtf2e1 gtf2e1 Gtf2h2c Gtf2h2c LOC108920015 LOC108920015 taf10 taf10 taf13 taf13 ercc2 ercc2 gtf2f2 gtf2f2 cdk7 cdk7 Taf2 Taf2 Z043_113326 Z043_113326 gtf2e2 gtf2e2 polr2g polr2g polr2k polr2k ENSSFOP00015005678 ENSSFOP00015005678 taf11 taf11 LOC108934435 LOC108934435 polr2e polr2e tbpl1 tbpl1 gtf2b gtf2b polr2l polr2l gtf2a2 gtf2a2 polr2j polr2j LOC108926245 LOC108926245 Z043_123412 Z043_123412 Taf7l Taf7l taf5 taf5 polr2c polr2c LOC108932948 LOC108932948 taf5l taf5l taf12 taf12 tbp tbp ENSSFOP00015044635 ENSSFOP00015044635 polr2f polr2f LOC108918651 LOC108918651 Polr2b Polr2b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ercc3TFIIH basal transcription factor complex helicase XPB subunit-like. (810 aa)
polr2dDNA-directed RNA polymerase II subunit RPB4-like. (144 aa)
Z043_105766Transcription initiation factor TFIID subunit 3-like. (948 aa)
Z043_124132Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (510 aa)
Z043_102220Transcription initiation factor TFIID subunit 3-like. (914 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1968 aa)
TAF6Transcription initiation factor TFIID subunit 6-like. (689 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC108922259General transcription factor IIA, 1, 19/37kDa-like. (367 aa)
gtf2h3General transcription factor IIH subunit 3-like. (301 aa)
spag16Sperm-associated antigen 16 protein-like. (642 aa)
ccnhCYCLIN domain-containing protein; Belongs to the cyclin family. (337 aa)
gtf2h5TFIIH basal transcription factor complex TTD-A subunit. (71 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
mnat1CDK-activating kinase assembly factor MAT1-like. (310 aa)
GTF2A1Transcription initiation factor IIA subunit 1-like isoform X1. (359 aa)
gtf2h1General transcription factor IIH subunit 1-like. (548 aa)
TAF4BTranscription initiation factor TFIID subunit 4-like. (1169 aa)
gtf2e1General transcription factor IIE subunit 1-like. (449 aa)
Gtf2h2cC2H2-type domain-containing protein. (398 aa)
LOC108920015Transcription initiation factor TFIID subunit 9-like. (253 aa)
taf10Transcription initiation factor TFIID subunit 10-like. (191 aa)
taf13Transcription initiation factor TFIID subunit 13-like. (124 aa)
ercc2TFIIH basal transcription factor complex helicase XPD subunit-like. (760 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (263 aa)
cdk7Cyclin-dependent kinase 7-like. (353 aa)
Taf2Transcription initiation factor TFIID subunit 2-like. (1220 aa)
Z043_113326Transcription initiation factor TFIID subunit 4-like. (1008 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (290 aa)
polr2gDNA-directed RNA polymerase II subunit RPB7-like. (180 aa)
polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4-like. (58 aa)
ENSSFOP00015005678annotation not available (88 aa)
taf11Transcription initiation factor TFIID subunit 11-like. (205 aa)
LOC108934435Uncharacterized protein. (1972 aa)
polr2eDNA-directed RNA polymerases i II and III subunit rpabc1-like. (233 aa)
tbpl1TATA box-binding protein-like protein 1-like. (194 aa)
gtf2bTranscription initiation factor IIB-like. (319 aa)
polr2lUncharacterized protein. (67 aa)
gtf2a2Transcription initiation factor IIA subunit 2-like. (109 aa)
polr2jDNA-directed RNA polymerase II subunit RPB11-a. (130 aa)
LOC108926245TAFH domain-containing protein. (1056 aa)
Z043_123412Uncharacterized protein. (286 aa)
Taf7lTranscription initiation factor TFIID subunit 7-like. (369 aa)
taf5Transcription initiation factor TFIID subunit 5-like. (764 aa)
polr2cDNA-directed RNA polymerase II subunit RPB3-like. (275 aa)
LOC108932948Transcription initiation factor TFIID subunit 4-like. (1048 aa)
taf5lTAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L-like. (594 aa)
taf12Transcription initiation factor TFIID subunit 12-like. (165 aa)
tbpTATA-box-binding protein-like. (316 aa)
ENSSFOP00015044635annotation not available (79 aa)
polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2-like. (127 aa)
LOC108918651Transcription initiation factor TFIID subunit 6-like. (668 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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