17 items (Scleropages formosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108929404	Aryl hydrocarbon receptor 2-like. (1045 aa)
	LOC108925152	Aryl hydrocarbon receptor nuclear translocator-like. (782 aa)
	LOC108928054	CS domain-containing protein. (156 aa)
	LOC108924212	Aryl hydrocarbon receptor-like. (983 aa)
	aip	Peptidylprolyl isomerase. (344 aa)
	LOC108924283	Aryl hydrocarbon receptor 2-like. (1056 aa)
	Z043_113850	Uncharacterized protein. (404 aa)
	Hsp90ab1	HATPase_c domain-containing protein. (734 aa)
	ENSSFOP00015036916	Aryl hydrocarbon receptor-like. (94 aa)
	LOC108927318	Uncharacterized protein. (1048 aa)
	LOC108939438	Prostaglandin E synthase 3-like. (159 aa)
	aipl1	Aryl-hydrocarbon-interacting protein-like 1-like. (374 aa)
	LOC108930520	Uncharacterized protein. (974 aa)
	LOC108935419	Uncharacterized protein. (662 aa)
	LOC108942035	PAS domain-containing protein. (779 aa)
	LOC108918186	Prostaglandin E synthase 3-like. (217 aa)
	LOC108941156	Aryl hydrocarbon receptor nuclear translocator 2-like. (713 aa)

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFOP00015036916	Hsp90ab1	ENSSFOP00015036916	ENSSFOP00015050126	Aryl hydrocarbon receptor-like.	HATPase_c domain-containing protein.	0.731
ENSSFOP00015036916	LOC108918186	ENSSFOP00015036916	ENSSFOP00015020794	Aryl hydrocarbon receptor-like.	Prostaglandin E synthase 3-like.	0.618
ENSSFOP00015036916	LOC108925152	ENSSFOP00015036916	ENSSFOP00015034783	Aryl hydrocarbon receptor-like.	Aryl hydrocarbon receptor nuclear translocator-like.	0.795
ENSSFOP00015036916	LOC108928054	ENSSFOP00015036916	ENSSFOP00015013866	Aryl hydrocarbon receptor-like.	CS domain-containing protein.	0.618
ENSSFOP00015036916	LOC108939438	ENSSFOP00015036916	ENSSFOP00015053212	Aryl hydrocarbon receptor-like.	Prostaglandin E synthase 3-like.	0.722
ENSSFOP00015036916	LOC108941156	ENSSFOP00015036916	ENSSFOP00015025937	Aryl hydrocarbon receptor-like.	Aryl hydrocarbon receptor nuclear translocator 2-like.	0.795
ENSSFOP00015036916	LOC108942035	ENSSFOP00015036916	ENSSFOP00015025279	Aryl hydrocarbon receptor-like.	PAS domain-containing protein.	0.795
ENSSFOP00015036916	Z043_113850	ENSSFOP00015036916	ENSSFOP00015010579	Aryl hydrocarbon receptor-like.	Uncharacterized protein.	0.739
ENSSFOP00015036916	aip	ENSSFOP00015036916	ENSSFOP00015054142	Aryl hydrocarbon receptor-like.	Peptidylprolyl isomerase.	0.739
ENSSFOP00015036916	aipl1	ENSSFOP00015036916	ENSSFOP00015066847	Aryl hydrocarbon receptor-like.	Aryl-hydrocarbon-interacting protein-like 1-like.	0.739
Hsp90ab1	ENSSFOP00015036916	ENSSFOP00015050126	ENSSFOP00015036916	HATPase_c domain-containing protein.	Aryl hydrocarbon receptor-like.	0.731
Hsp90ab1	LOC108918186	ENSSFOP00015050126	ENSSFOP00015020794	HATPase_c domain-containing protein.	Prostaglandin E synthase 3-like.	0.869
Hsp90ab1	LOC108924212	ENSSFOP00015050126	ENSSFOP00015011190	HATPase_c domain-containing protein.	Aryl hydrocarbon receptor-like.	0.744
Hsp90ab1	LOC108924283	ENSSFOP00015050126	ENSSFOP00015011144	HATPase_c domain-containing protein.	Aryl hydrocarbon receptor 2-like.	0.744
Hsp90ab1	LOC108927318	ENSSFOP00015050126	ENSSFOP00015000356	HATPase_c domain-containing protein.	Uncharacterized protein.	0.744
Hsp90ab1	LOC108928054	ENSSFOP00015050126	ENSSFOP00015013866	HATPase_c domain-containing protein.	CS domain-containing protein.	0.874
Hsp90ab1	LOC108929404	ENSSFOP00015050126	ENSSFOP00015027301	HATPase_c domain-containing protein.	Aryl hydrocarbon receptor 2-like.	0.744
Hsp90ab1	LOC108930520	ENSSFOP00015050126	ENSSFOP00015064592	HATPase_c domain-containing protein.	Uncharacterized protein.	0.744
Hsp90ab1	LOC108935419	ENSSFOP00015050126	ENSSFOP00015016520	HATPase_c domain-containing protein.	Uncharacterized protein.	0.679
Hsp90ab1	LOC108939438	ENSSFOP00015050126	ENSSFOP00015053212	HATPase_c domain-containing protein.	Prostaglandin E synthase 3-like.	0.961