Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABB58091.1 | ntcA | Synpcc7942_2061 | Synpcc7942_0127 | Conserved hypothetical protein. | Transcriptional regulator, Crp/Fnr family; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | 0.998 |
| cbbL | ccmL | Synpcc7942_1426 | Synpcc7942_1422 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | Carbon dioxide concentrating mechanism protein CcmL; To E.coli and S.typhimurium CchB. | 0.889 |
| cbbL | ccmM | Synpcc7942_1426 | Synpcc7942_1423 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | Carbonate dehydratase; The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator. | 0.999 |
| cbbL | cpcA1 | Synpcc7942_1426 | Synpcc7942_1048 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | Phycocyanin, alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.474 |
| cbbL | ntcA | Synpcc7942_1426 | Synpcc7942_0127 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | Transcriptional regulator, Crp/Fnr family; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | 0.745 |
| ccmL | cbbL | Synpcc7942_1422 | Synpcc7942_1426 | Carbon dioxide concentrating mechanism protein CcmL; To E.coli and S.typhimurium CchB. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | 0.889 |
| ccmL | ccmM | Synpcc7942_1422 | Synpcc7942_1423 | Carbon dioxide concentrating mechanism protein CcmL; To E.coli and S.typhimurium CchB. | Carbonate dehydratase; The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator. | 0.982 |
| ccmM | cbbL | Synpcc7942_1423 | Synpcc7942_1426 | Carbonate dehydratase; The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | 0.999 |
| ccmM | ccmL | Synpcc7942_1423 | Synpcc7942_1422 | Carbonate dehydratase; The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator. | Carbon dioxide concentrating mechanism protein CcmL; To E.coli and S.typhimurium CchB. | 0.982 |
| cpcA1 | cbbL | Synpcc7942_1048 | Synpcc7942_1426 | Phycocyanin, alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | 0.474 |
| cpcA1 | cpcB1 | Synpcc7942_1048 | Synpcc7942_1047 | Phycocyanin, alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | Phycocyanin, beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.999 |
| cpcA1 | cpcE | Synpcc7942_1048 | Synpcc7942_1054 | Phycocyanin, alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | PBS lyase HEAT-like repeat; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family. | 0.996 |
| cpcA1 | cpcF | Synpcc7942_1048 | Synpcc7942_1055 | Phycocyanin, alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | Phycocyanin alpha-subunit phycocyanobilin lyase; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family. | 0.993 |
| cpcB1 | cpcA1 | Synpcc7942_1047 | Synpcc7942_1048 | Phycocyanin, beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | Phycocyanin, alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.999 |
| cpcB1 | cpcE | Synpcc7942_1047 | Synpcc7942_1054 | Phycocyanin, beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | PBS lyase HEAT-like repeat; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family. | 0.996 |
| cpcB1 | cpcF | Synpcc7942_1047 | Synpcc7942_1055 | Phycocyanin, beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | Phycocyanin alpha-subunit phycocyanobilin lyase; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family. | 0.991 |
| cpcB1 | ntcA | Synpcc7942_1047 | Synpcc7942_0127 | Phycocyanin, beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | Transcriptional regulator, Crp/Fnr family; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | 0.526 |
| cpcE | cpcA1 | Synpcc7942_1054 | Synpcc7942_1048 | PBS lyase HEAT-like repeat; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family. | Phycocyanin, alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.996 |
| cpcE | cpcB1 | Synpcc7942_1054 | Synpcc7942_1047 | PBS lyase HEAT-like repeat; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family. | Phycocyanin, beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.996 |
| cpcE | cpcF | Synpcc7942_1054 | Synpcc7942_1055 | PBS lyase HEAT-like repeat; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family. | Phycocyanin alpha-subunit phycocyanobilin lyase; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family. | 0.999 |
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