(12 nodes) Cytosolic ribosome network (Dichomitus squalens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4Q9N2R4	40S ribosomal protein S29A. (56 aa)
	A0A4Q9NG07	Ribosomal protein L39e. (51 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	A0A4Q9NJ61	60S ribosomal protein L10. (216 aa)
	A0A4Q9NS70	60S ribosomal protein L17/L23; Belongs to the universal ribosomal protein uL22 family. (196 aa)
	A0A4Q9NSR1	Ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	A0A4Q9PCH1	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (101 aa)
	A0A4Q9PPH9	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (195 aa)
	A0A4Q9PYH9	60S ribosomal protein L14. (138 aa)
	A0A4Q9Q574	Ribosomal L28e/Mak16. (142 aa)
	A0A4Q9Q607	60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (200 aa)
	A0A4Q9QD32	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (151 aa)

Your Current Organism:

Dichomitus squalens

NCBI taxonomy Id: 114155
Other names: D. squalens

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4Q9N2R4	A0A4Q9NG07	A0A4Q9N2R4	A0A4Q9NG07	40S ribosomal protein S29A.	Ribosomal protein L39e.	0.999
A0A4Q9N2R4	A0A4Q9NJ61	A0A4Q9N2R4	A0A4Q9NJ61	40S ribosomal protein S29A.	60S ribosomal protein L10.	0.999
A0A4Q9N2R4	A0A4Q9NS70	A0A4Q9N2R4	A0A4Q9NS70	40S ribosomal protein S29A.	60S ribosomal protein L17/L23; Belongs to the universal ribosomal protein uL22 family.	0.999
A0A4Q9N2R4	A0A4Q9NSR1	A0A4Q9N2R4	A0A4Q9NSR1	40S ribosomal protein S29A.	Ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family.	0.999
A0A4Q9N2R4	A0A4Q9PCH1	A0A4Q9N2R4	A0A4Q9PCH1	40S ribosomal protein S29A.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
A0A4Q9N2R4	A0A4Q9PPH9	A0A4Q9N2R4	A0A4Q9PPH9	40S ribosomal protein S29A.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
A0A4Q9N2R4	A0A4Q9PYH9	A0A4Q9N2R4	A0A4Q9PYH9	40S ribosomal protein S29A.	60S ribosomal protein L14.	0.999
A0A4Q9N2R4	A0A4Q9Q574	A0A4Q9N2R4	A0A4Q9Q574	40S ribosomal protein S29A.	Ribosomal L28e/Mak16.	0.999
A0A4Q9N2R4	A0A4Q9Q607	A0A4Q9N2R4	A0A4Q9Q607	40S ribosomal protein S29A.	60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999
A0A4Q9N2R4	A0A4Q9QD32	A0A4Q9N2R4	A0A4Q9QD32	40S ribosomal protein S29A.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.999
A0A4Q9N2R4	RPS1	A0A4Q9N2R4	A0A4Q9NGZ4	40S ribosomal protein S29A.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
A0A4Q9NG07	A0A4Q9N2R4	A0A4Q9NG07	A0A4Q9N2R4	Ribosomal protein L39e.	40S ribosomal protein S29A.	0.999
A0A4Q9NG07	A0A4Q9NJ61	A0A4Q9NG07	A0A4Q9NJ61	Ribosomal protein L39e.	60S ribosomal protein L10.	0.999
A0A4Q9NG07	A0A4Q9NS70	A0A4Q9NG07	A0A4Q9NS70	Ribosomal protein L39e.	60S ribosomal protein L17/L23; Belongs to the universal ribosomal protein uL22 family.	0.999
A0A4Q9NG07	A0A4Q9NSR1	A0A4Q9NG07	A0A4Q9NSR1	Ribosomal protein L39e.	Ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family.	0.999
A0A4Q9NG07	A0A4Q9PCH1	A0A4Q9NG07	A0A4Q9PCH1	Ribosomal protein L39e.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
A0A4Q9NG07	A0A4Q9PPH9	A0A4Q9NG07	A0A4Q9PPH9	Ribosomal protein L39e.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
A0A4Q9NG07	A0A4Q9PYH9	A0A4Q9NG07	A0A4Q9PYH9	Ribosomal protein L39e.	60S ribosomal protein L14.	0.999
A0A4Q9NG07	A0A4Q9Q574	A0A4Q9NG07	A0A4Q9Q574	Ribosomal protein L39e.	Ribosomal L28e/Mak16.	0.999
A0A4Q9NG07	A0A4Q9Q607	A0A4Q9NG07	A0A4Q9Q607	Ribosomal protein L39e.	60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999