STRINGSTRING
pyrD pyrD AFE05861.1 AFE05861.1 wecC wecC dusA dusA AFE06521.1 AFE06521.1 tyrA tyrA fadE fadE AFE06944.1 AFE06944.1 dapB dapB inhA inhA yfmJ1 yfmJ1 fadE25a fadE25a dus1 dus1 mmgC3 mmgC3 hemF hemF mmgC2 mmgC2 fadE25 fadE25 AFE03478.1 AFE03478.1 aidB aidB sdhC sdhC yfmJ yfmJ hemN hemN sdhA sdhA sdhB sdhB AFE03904.1 AFE03904.1 bcd bcd AFE04033.1 AFE04033.1 bbsG bbsG yngJ yngJ mmgC mmgC yngJ1 yngJ1 bbsG1 bbsG1 acdA acdA AFE05411.1 AFE05411.1 aidB1 aidB1 hemN1 hemN1 yngJ2 yngJ2 acdA1 acdA1 fadE10 fadE10 acdA2 acdA2 mmgC1 mmgC1 AFE05999.1 AFE05999.1 aidB2 aidB2 yngJ3 yngJ3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pyrDDihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (362 aa)
AFE05861.1FMN-binding pyridoxamine 5-phosphate oxidase-like protein. (211 aa)
wecCLipopolysaccharide biosynthesis protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (442 aa)
dusAtRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (337 aa)
AFE06521.1Hypothetical protein. (311 aa)
tyrAPrephenate dehydrogenase/chorismate mutase. (342 aa)
fadEacyl-CoA dehydrogenase. (602 aa)
AFE06944.1acyl-CoA dehydrogenase. (378 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (272 aa)
inhAEnoyl-(acyl carrier protein) reductase. (277 aa)
yfmJ1Zinc-binding dehydrogenase family oxidoreductase. (337 aa)
fadE25aacyl-CoA dehydrogenase. (373 aa)
dus1Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (337 aa)
mmgC3Putative acyl-CoA dehydrogenase. (804 aa)
hemFCoproporphyrinogen III oxidase. (299 aa)
mmgC2acyl-CoA dehydrogenase. (379 aa)
fadE25acyl-CoA dehydrogenase. (604 aa)
AFE03478.1Putative general stress protein 26. (173 aa)
aidBacyl-CoA dehydrogenase family protein. (603 aa)
sdhCSuccinate dehydrogenase cytochrome b558 subunit. (227 aa)
yfmJZinc-binding dehydrogenase family oxidoreductase. (340 aa)
hemNPutative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (401 aa)
sdhASuccinate dehydrogenase flavoprotein subunit. (625 aa)
sdhBSuccinate dehydrogenase iron-sulfur subunit. (268 aa)
AFE03904.1Hypothetical protein. (268 aa)
bcdacyl-CoA dehydrogenase, short-chain specific. (393 aa)
AFE04033.1fumarate/succinate/L-aspartate dehydrogenase. (551 aa)
bbsGacyl-CoA dehydrogenase family protein. (412 aa)
yngJButyryl-CoA dehydrogenase. (381 aa)
mmgCacyl-CoA dehydrogenase. (382 aa)
yngJ1acyl-CoA dehydrogenase. (379 aa)
bbsG1acyl-CoA dehydrogenase. (400 aa)
acdAacyl-CoA dehydrogenase. (388 aa)
AFE05411.1Hypothetical protein. (203 aa)
aidB1Putative acyl-CoA dehydrogenase. (553 aa)
hemN1Coproporphyrinogen III oxidase. (437 aa)
yngJ2acyl-CoA dehydrogenase. (380 aa)
acdA1acyl-CoA dehydrogenase. (381 aa)
fadE10acyl-CoA dehydrogenase. (581 aa)
acdA2acyl-CoA dehydrogenase. (381 aa)
mmgC1acyl-CoA dehydrogenase. (384 aa)
AFE05999.1Hypothetical protein. (220 aa)
aidB2acyl-CoA dehydrogenase. (614 aa)
yngJ3acyl-CoA dehydrogenase. (383 aa)
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.