(28 nodes) Chloramphenicol acetyltransferase-like domain superfamily network (Corallococcus coralloides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tycC3	Tyrocidine synthase. (7667 aa)
	AFE07464.1	2-oxo acid dehydrogenase acyltransferase catalytic subunit. (280 aa)
	sucB	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (401 aa)
	tycC8	Long-chain-fatty-acid--CoA ligase. (3461 aa)
	lgrC4	Linear gramicidin synthase subunit C. (1107 aa)
	lgrC3	Linear gramicidin synthase subunit C. (1815 aa)
	pdhC	Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (547 aa)
	AFE05924.1	Hypothetical protein. (424 aa)
	tycC7	Long-chain-fatty-acid--CoA ligase. (4027 aa)
	lgrC2	Non-ribosomal peptide synthase. (5417 aa)
	tycC6	Long-chain-fatty-acid--CoA ligase. (2570 aa)
	mxcG	Non-ribosomal peptide synthase MxcG. (1460 aa)
	lgrC1	Linear gramicidin synthase subunit C. (1689 aa)
	AFE05697.1	Long-chain-fatty-acid--CoA ligase. (11842 aa)
	bacA1	Non-ribosomal peptide synthetase/polyketide synthase. (12261 aa)
	pcbAB	Long-chain-fatty-acid--CoA ligase. (10504 aa)
	pdhC1	Alpha keto acid dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase. (423 aa)
	AFE05322.1	Long-chain-fatty-acid--CoA ligase. (10850 aa)
	pksN1	Malonyl CoA-acyl carrier protein transacylase. (5608 aa)
	tycC5	Long-chain-fatty-acid--CoA ligase; Belongs to the ATP-dependent AMP-binding enzyme family. (2151 aa)
	tycC4	Tyrocidine synthase. (8722 aa)
	tycC2	Non-ribosomal peptide synthetase. (9781 aa)
	bacA	Non-ribosomal peptide synthetase. (4082 aa)
	AFE04647.1	2-oxo acid dehydrogenase acyltransferase catalytic subunit. (279 aa)
	tycC1	Long-chain-fatty-acid--CoA ligase. (8722 aa)
	tycC	Long-chain-fatty-acid--CoA ligase. (4274 aa)
	AFE03862.1	Hypothetical protein. (501 aa)
	lgrC	Linear gramicidin synthase subunit C. (2866 aa)

Your Current Organism:

Corallococcus coralloides

NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE03862.1	AFE05322.1	COCOR_01083	COCOR_03598	Hypothetical protein.	Long-chain-fatty-acid--CoA ligase.	0.420
AFE03862.1	AFE05697.1	COCOR_01083	COCOR_04204	Hypothetical protein.	Long-chain-fatty-acid--CoA ligase.	0.489
AFE03862.1	bacA	COCOR_01083	COCOR_02579	Hypothetical protein.	Non-ribosomal peptide synthetase.	0.422
AFE03862.1	bacA1	COCOR_01083	COCOR_04203	Hypothetical protein.	Non-ribosomal peptide synthetase/polyketide synthase.	0.504
AFE03862.1	pcbAB	COCOR_01083	COCOR_03928	Hypothetical protein.	Long-chain-fatty-acid--CoA ligase.	0.449
AFE04647.1	AFE07464.1	COCOR_02440	COCOR_07322	2-oxo acid dehydrogenase acyltransferase catalytic subunit.	2-oxo acid dehydrogenase acyltransferase catalytic subunit.	0.909
AFE04647.1	pdhC	COCOR_02440	COCOR_05376	2-oxo acid dehydrogenase acyltransferase catalytic subunit.	Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.921
AFE05322.1	AFE03862.1	COCOR_03598	COCOR_01083	Long-chain-fatty-acid--CoA ligase.	Hypothetical protein.	0.420
AFE05322.1	AFE05697.1	COCOR_03598	COCOR_04204	Long-chain-fatty-acid--CoA ligase.	Long-chain-fatty-acid--CoA ligase.	0.999
AFE05322.1	AFE05924.1	COCOR_03598	COCOR_04611	Long-chain-fatty-acid--CoA ligase.	Hypothetical protein.	0.907
AFE05322.1	bacA	COCOR_03598	COCOR_02579	Long-chain-fatty-acid--CoA ligase.	Non-ribosomal peptide synthetase.	0.999
AFE05322.1	bacA1	COCOR_03598	COCOR_04203	Long-chain-fatty-acid--CoA ligase.	Non-ribosomal peptide synthetase/polyketide synthase.	0.999
AFE05322.1	lgrC	COCOR_03598	COCOR_00891	Long-chain-fatty-acid--CoA ligase.	Linear gramicidin synthase subunit C.	0.999
AFE05322.1	lgrC1	COCOR_03598	COCOR_04218	Long-chain-fatty-acid--CoA ligase.	Linear gramicidin synthase subunit C.	0.990
AFE05322.1	lgrC2	COCOR_03598	COCOR_04396	Long-chain-fatty-acid--CoA ligase.	Non-ribosomal peptide synthase.	0.999
AFE05322.1	lgrC3	COCOR_03598	COCOR_05735	Long-chain-fatty-acid--CoA ligase.	Linear gramicidin synthase subunit C.	0.994
AFE05322.1	lgrC4	COCOR_03598	COCOR_05738	Long-chain-fatty-acid--CoA ligase.	Linear gramicidin synthase subunit C.	0.915
AFE05322.1	mxcG	COCOR_03598	COCOR_04377	Long-chain-fatty-acid--CoA ligase.	Non-ribosomal peptide synthase MxcG.	0.998
AFE05322.1	pcbAB	COCOR_03598	COCOR_03928	Long-chain-fatty-acid--CoA ligase.	Long-chain-fatty-acid--CoA ligase.	0.999
AFE05322.1	pksN1	COCOR_03598	COCOR_03409	Long-chain-fatty-acid--CoA ligase.	Malonyl CoA-acyl carrier protein transacylase.	0.793

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