STRINGSTRING
thrA thrA prs1 prs1 ocd1 ocd1 aatB aatB glnA glnA cysK1 cysK1 gltB gltB gltB1 gltB1 argE argE serB serB aspC aspC proB proB acnA acnA aroQ aroQ ltaA ltaA AFE04031.1 AFE04031.1 AFE04067.1 AFE04067.1 aspC2 aspC2 cysK cysK srpH srpH AFE04336.1 AFE04336.1 mdeA mdeA metH metH gpmA gpmA tktB tktB dxs1 dxs1 lysX lysX argC argC argB argB lysK lysK alsS alsS thrC1 thrC1 argC1 argC1 argG argG argH argH argE1 argE1 argB1 argB1 argF argF prs prs dapF dapF ask ask rpiB rpiB glyA glyA cbs cbs AFE04822.1 AFE04822.1 aroF aroF pheA1 pheA1 pheA pheA cysE cysE argD argD aatA aatA serC serC eno eno lysA1 lysA1 hisG hisG hisD hisD hisC hisC hisH hisH hisA hisA hisB hisB hisF hisF hisIE hisIE ilvB ilvB hisC1 hisC1 pfkA1 pfkA1 ybdL ybdL fba2 fba2 aroH aroH icd icd aroF1 aroF1 AFE05873.1 AFE05873.1 aroC aroC aroB aroB aroA aroA gltA gltA pyk1 pyk1 lysC lysC thrC thrC proC proC phhA phhA asd asd hom hom argD1 argD1 ilvE ilvE tpiA tpiA gapA gapA asnB asnB AFE06289.1 AFE06289.1 asd1 asd1 thrB thrB lysA2 lysA2 citZ1 citZ1 cbs1 cbs1 metB1 metB1 glnA1 glnA1 nifP nifP ilvA ilvA metX1 metX1 thrA1 thrA1 tal tal dapB dapB dapA dapA lysA lysA aroF2 aroF2 trpD trpD trpC trpC trpF trpF trpB trpB trpA trpA trpG trpG trpE trpE rpiA rpiA sdaA sdaA tkt1 tkt1 tal2 tal2 cobC cobC rpe rpe pyk pyk leuB2 leuB2 serA serA pfkA pfkA metK metK dapE2 dapE2 dapD dapD citZ citZ AFE07713.1 AFE07713.1 tkt tkt cysE1 cysE1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
thrAAspartate kinase/homoserine dehydrogenase. (818 aa)
prs1Putative ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. (306 aa)
ocd1Ornithine cyclodeaminase/mu-crystallin family protein. (320 aa)
aatBClass I aminotransferase. (431 aa)
glnAGlutamate--ammonia ligase. (479 aa)
cysK1Putative cysteine synthase. (319 aa)
gltBGlutamate synthase small subunit. (486 aa)
gltB1Glutamate synthase large subunit. (1523 aa)
argEAcetylornithine deacetylase. (380 aa)
serBACT domain-containing protein/phosphoserine phosphatase SerB. (398 aa)
aspCClass I/II aminotransferase. (392 aa)
proBGlutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (366 aa)
acnAAconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (911 aa)
aroQ3-dehydroquinate dehydratase; Belongs to the type-II 3-dehydroquinase family. (319 aa)
ltaAL-allo-threonine aldolase. (341 aa)
AFE04031.1Homoserine O-acetyltransferase. (372 aa)
AFE04067.1Fructose-bisphosphate aldolase class i. (354 aa)
aspC2Class I aminotransferase. (412 aa)
cysKCysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. (306 aa)
srpHPutative serine O-acetyltransferase. (281 aa)
AFE04336.1Asparagine synthase. (520 aa)
mdeACys/Met metabolism PLP-dependent enzyme. (395 aa)
metH5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1171 aa)
gpmAPutative 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (199 aa)
tktBPutative transketolase N-terminal section. (315 aa)
dxs1Putative transketolase C-terminal section. (345 aa)
lysXalpha-aminoadipate--lysW ligase lysX; Belongs to the RimK family. (284 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (347 aa)
argBPutative acetylglutamate kinase-like protein. (289 aa)
lysKAcetyl-lysine deacetylase. (358 aa)
alsSAcetolactate synthase; Belongs to the TPP enzyme family. (543 aa)
thrC1Threonine synthase. (390 aa)
argC1N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (356 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (395 aa)
argHArgininosuccinate lyase. (449 aa)
argE1M20A family peptidase. (353 aa)
argB1Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (308 aa)
argFN-acetylornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (334 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (317 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (283 aa)
askAspartate kinase; Belongs to the aspartokinase family. (397 aa)
rpiBRibose 5-phosphate isomerase B. (148 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (418 aa)
cbsCysteine synthase A. (330 aa)
AFE04822.1Aspartate aminotransferase. (550 aa)
aroFPutative phospho-2-dehydro-3-deoxyheptonate aldolase. (378 aa)
pheA1Prephenate dehydratase. (277 aa)
pheAChorismate mutase/prephenate dehydratase. (379 aa)
cysEHexapeptide repeat-containing transferase. (176 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (404 aa)
aatAPutative aspartate aminotransferase. (397 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (362 aa)
enoPhosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (432 aa)
lysA1Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (466 aa)
hisGATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. (285 aa)
hisDHistidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (433 aa)
hisCHistidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (345 aa)
hisHImidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (197 aa)
hisAPhosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. (238 aa)
hisBImidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (181 aa)
hisFImidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (253 aa)
hisIEphosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family. (205 aa)
ilvBAcetolactate synthase, large subunit; Belongs to the TPP enzyme family. (638 aa)
hisC1Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (363 aa)
pfkA16-phosphofructokinase I; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. (365 aa)
ybdLClass I/II aminotransferase. (399 aa)
fba2Fructose-bisphosphate aldolase. (306 aa)
aroH3-deoxy-7-phosphoheptulonate synthase. (426 aa)
icdIsocitrate dehydrogenase, NADP-dependent. (431 aa)
aroF1Phospho-2-dehydro-3-deoxyheptonate aldolase. (263 aa)
AFE05873.1Putative shikimate kinase. (158 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (339 aa)
aroB3-dehydroquinate synthase. (356 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (431 aa)
gltACitrate synthase; Belongs to the citrate synthase family. (431 aa)
pyk1Pyruvate kinase; Belongs to the pyruvate kinase family. (466 aa)
lysCAspartate kinase; Belongs to the aspartokinase family. (425 aa)
thrCThreonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (443 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (283 aa)
phhAPhenylalanine 4-monooxygenase. (531 aa)
asdAspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. (362 aa)
homHomoserine dehydrogenase. (351 aa)
argD1Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (407 aa)
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (316 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (253 aa)
gapAGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
asnBAsparagine synthase. (656 aa)
AFE06289.1Hypothetical protein. (250 aa)
asd1Semialdehyde dehydrogenase family protein; Belongs to the aspartate-semialdehyde dehydrogenase family. (343 aa)
thrBHomoserine kinase; Belongs to the pseudomonas-type ThrB family. (322 aa)
lysA2Pyridoxal-dependent decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (482 aa)
citZ1Citrate synthase. (412 aa)
cbs1Cystathionine beta-synthase. (455 aa)
metB1Cys/Met metabolism PLP-dependent enzyme. (381 aa)
glnA1Glutamine synthetase family protein. (487 aa)
nifPPutative serine acetyltransferase. (145 aa)
ilvAThreonine dehydratase. (406 aa)
metX1Putative homoserine-O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. (445 aa)
thrA1Aspartate kinase/homoserine dehydrogenase. (837 aa)
talPutative translaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (221 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (272 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (295 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (413 aa)
aroF2Phospho-2-dehydro-3-deoxyheptonate aldolase. (341 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (338 aa)
trpCIndole-3-glycerol phosphate synthase; Belongs to the TrpC family. (272 aa)
trpFN-(5phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (210 aa)
trpBTryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (401 aa)
trpATryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (263 aa)
trpGPutative anthranilate synthase, glutamine amidotransferase component. (187 aa)
trpEPutative anthranilate synthase, component I. (498 aa)
rpiARibose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (235 aa)
sdaAL-serine ammonia-lyase. (492 aa)
tkt1Transketolase. (635 aa)
tal2Transaldolase family protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. (373 aa)
cobCAlpha-ribazole-5-phosphate phosphatase; Belongs to the phosphoglycerate mutase family. (209 aa)
rpeRibulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (219 aa)
pykPyruvate kinase; Belongs to the pyruvate kinase family. (476 aa)
leuB2Putative isocitrate dehydrogenase, NAD-dependent. (335 aa)
serAD-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (398 aa)
pfkA6-phosphofructokinase I; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. (345 aa)
metKS-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (396 aa)
dapE2Succinyl-diaminopimelate desuccinylase. (362 aa)
dapD2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. (275 aa)
citZCitrate synthase. (431 aa)
AFE07713.1Putative asparagine synthetase. (501 aa)
tktTransketolase; Belongs to the transketolase family. (685 aa)
cysE1Hexapeptide repeat-containing transferase. (178 aa)
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (14%) [HD]