(30 nodes) Mixed, incl. Polyamine binding, and ABC-type polyamine transporter activity network (Rhizobium sp. CF080)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUB97816.1	Hypothetical protein; KEGG: ABC transporter substrate-binding protein. (345 aa)
	EUB97817.1	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (347 aa)
	EUB97818.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease. (285 aa)
	EUB97819.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease. (260 aa)
	EUC00244.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: potI, Spermidine/putrescine transport system permease. (272 aa)
	EUC00245.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: potB, ABC transporter, membrane spanning protein. (305 aa)
	potA	Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (385 aa)
	EUC00247.1	Hypothetical protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (365 aa)
	EUB98613.1	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (354 aa)
	EUB98614.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: polyamine ABC transporter permease. (578 aa)
	EUB98615.1	Hypothetical protein; KEGG: polyamine ABC transporter substrate-binding protein. (357 aa)
	EUB98621.1	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: polyamine-transporting ATPase; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (354 aa)
	EUB98622.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component. (267 aa)
	EUB98623.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter. (282 aa)
	EUB98624.1	Hypothetical protein; KEGG: putative ABC transporter periplasmic solute-binding protein. (346 aa)
	EUB98855.1	KEGG: hypothetical protein. (365 aa)
	EUB98856.1	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC-type spermidine/putrescine transporter, ATPase component; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (355 aa)
	EUB98857.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC-type spermidine/putrescine transporter, permease I. (294 aa)
	EUB98858.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: spermidine/putrescine ABC transporter. (264 aa)
	EUB99368.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component. (309 aa)
	EUB99369.1	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, ABC-type transporter, integral membrane subunit, Transport-associated OB domain-containing protein; KEGG: hypothetical protein; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family. (671 aa)
	EUB99370.1	Hypothetical protein; KEGG: extracellular solute-binding protein family 1. (356 aa)
	EUB99371.1	Hypothetical protein; KEGG: putative spermidine/putrescine transport system substrate-binding protein. (383 aa)
	EUB99859.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein. (283 aa)
	EUB99860.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein. (269 aa)
	potA-2	Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (397 aa)
	EUB99862.1	Hypothetical protein; KEGG: extracellular solute-binding protein. (354 aa)
	EUB98294.1	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein. (604 aa)
	EUB98295.1	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: POPT family ABC transporter permease; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (365 aa)
	EUB98296.1	Hypothetical protein; KEGG: family 1 extracellular solute-binding protein. (360 aa)

Your Current Organism:

Rhizobium sp. CF080

NCBI taxonomy Id: 1144310
Other names: R. sp. CF080

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUB97816.1	EUB97817.1	PMI07_000376	PMI07_000377	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	0.806
EUB97816.1	EUB97818.1	PMI07_000376	PMI07_000378	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease.	0.948
EUB97816.1	EUB97819.1	PMI07_000376	PMI07_000379	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease.	0.936
EUB97816.1	EUB98294.1	PMI07_000376	PMI07_006608	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein.	0.960
EUB97816.1	EUB98295.1	PMI07_000376	PMI07_006609	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: POPT family ABC transporter permease; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	0.623
EUB97816.1	EUB98613.1	PMI07_000376	PMI07_004894	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	0.646
EUB97816.1	EUB98614.1	PMI07_000376	PMI07_004895	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: polyamine ABC transporter permease.	0.954
EUB97816.1	EUB98621.1	PMI07_000376	PMI07_004902	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: polyamine-transporting ATPase; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	0.604
EUB97816.1	EUB98622.1	PMI07_000376	PMI07_004903	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component.	0.830
EUB97816.1	EUB98623.1	PMI07_000376	PMI07_004904	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter.	0.866
EUB97816.1	EUB98855.1	PMI07_000376	PMI07_005136	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	KEGG: hypothetical protein.	0.530
EUB97816.1	EUB98856.1	PMI07_000376	PMI07_005137	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC-type spermidine/putrescine transporter, ATPase component; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	0.583
EUB97816.1	EUB98857.1	PMI07_000376	PMI07_005138	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC-type spermidine/putrescine transporter, permease I.	0.881
EUB97816.1	EUB98858.1	PMI07_000376	PMI07_005139	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: spermidine/putrescine ABC transporter.	0.897
EUB97816.1	EUB99368.1	PMI07_000376	PMI07_005649	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component.	0.871
EUB97816.1	EUB99369.1	PMI07_000376	PMI07_005650	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	Polyamine-transporting ATPase; PFAM: ABC transporter related protein, ABC-type transporter, integral membrane subunit, Transport-associated OB domain-containing protein; KEGG: hypothetical protein; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family.	0.900
EUB97816.1	EUB99859.1	PMI07_000376	PMI07_006140	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein.	0.842
EUB97816.1	EUB99860.1	PMI07_000376	PMI07_006141	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein.	0.851
EUB97816.1	EUB99862.1	PMI07_000376	PMI07_006143	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	Hypothetical protein; KEGG: extracellular solute-binding protein.	0.543
EUB97816.1	EUC00244.1	PMI07_000376	PMI07_003530	Hypothetical protein; KEGG: ABC transporter substrate-binding protein.	PFAM: ABC-type transporter, integral membrane subunit; KEGG: potI, Spermidine/putrescine transport system permease.	0.891